RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TP53I3Q53FA7 332 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 OR52W1Q6IF63 320 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 CRIP3Q6Q6R5 217 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 FAM58AQ8N1B3 248 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 PRSS35Q8N3Z0 413 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 SLAMF9Q96A28 289 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 RNFT2Q96EX2 444 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 CPNE2Q96FN4 548 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 Q96MT0 163 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 INPP5EQ9NRR6 644 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 TCF19Q9Y242 345 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 UBE2J1Q9Y385 318 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 IGKV1-27A0A075B6S5 117 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 ODF3BA8MYP8 253 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 ALX3O95076 343 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 APOL3O95236 402 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 AZGP1P25311 298 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 BMXP51813 675 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 GRK1Q15835 563 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 ZNF782Q6ZMW2 699 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 SYS1Q8N2H4 156 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 C17orf50Q8WW18 174 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 OPALINQ96PE5 141 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 GAL3ST2Q9H3Q3 398 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 SESN1Q9Y6P5 492 aa11.69□□□□□ -0.54
HMGCS1-203ENST00000507004 J3QRE1 110 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 SH2D1BO14796 132 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 ENTPD6O75354 484 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 FADS2O95864 444 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 GABRR1P24046 479 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 KIR3DL2P43630 455 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 POU3F4P49335 361 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 PDZK1IP1Q13113 114 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 FAM189A2Q15884 450 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 RTN4RL2Q86UN3 420 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 Q8N2B8 174 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 ZNF676Q8N7Q3 588 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 CHST4Q8NCG5 386 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 PYDC1Q8WXC3 89 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 CFHR4Q92496 578 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 CREB3L1Q96BA8 519 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 ADAT3Q96EY9 351 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 PRSS22Q9GZN4 317 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 EXOSC4Q9NPD3 245 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 FRRS1LQ9P0K9 344 aa11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 EXOGQ9Y2C4 368 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-203ENST00000507004 TET2Q6N021 2002 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 TRGV10A0A0A0MS01 117 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 TMEM82A0PJX8 343 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 EI24O14681 340 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 CCDC159P0C7I6 412 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 DBTP11182 482 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 PRKACAP17612 351 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 P2RX3P56373 397 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 EMX1Q04741 257 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 DYNC1I2Q13409 638 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 ALKBH1Q13686 389 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 EDDM3AQ14507 147 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 C16orf82Q7Z2V1 217 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 BATF2Q8N1L9 274 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 KLHDC1Q8N7A1 406 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 ZNF596Q8TC21 504 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 PIFOQ8TCI5 191 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 FGGYQ96C11 551 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 AKR1E2Q96JD6 320 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 C9orf16Q9BUW7 83 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 CLEC7AQ9BXN2 247 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 TMEM133Q9H2Q1 129 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 HMG20AQ9NP66 347 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 TAS2R3Q9NYW6 316 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 GMPPBQ9Y5P6 360 aa11.67□□□□□ -0.54
HMGCS1-203ENST00000507004 IGKV1-9A0A0C4DH69 117 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 A6NDX4 124 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 TMEM212A6NML5 194 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 F8VVB4 439 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 F8VWA3 439 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 H3BSH0 61 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 F2RL2O00254 374 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 PEX14O75381 377 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 KDM4BO94953 1096 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 TSPAN15O95858 294 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 CSN2P05814 226 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 LMO1P25800 156 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 HTR1DP28221 377 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 GALEQ14376 348 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 SSX2Q16385 188 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 CCDC121Q6ZUS5 278 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 LHFPL4Q7Z7J7 247 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 TRAPPC6BQ86SZ2 158 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 SERPINA12Q8IW75 414 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 RDH10Q8IZV5 341 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 OR5D14Q8NGL3 314 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 OR13C3Q8NGS6 347 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 COMMD4Q9H0A8 199 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 ZCCHC4Q9H5U6 513 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 RBFOX1Q9NWB1 397 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 DSCAML1Q8TD84 2053 aa11.66□□□□□ -0.54
HMGCS1-203ENST00000507004 PKD1L1Q8TDX9 2849 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms