RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 OR6C68A6NDL8 312 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 SAC3D1A6NKF1 404 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 LINC01548A6NM66 108 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 SERPINE3A8MV23 424 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 SLC1A7O00341 560 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 SLC25A17O43808 307 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 NOL3O60936 208 aaKnown RBP5.4□□□□□ -1.54
VCAN-206ENST00000505615 MMP23AO75900 390 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 CST4P01036 141 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 IGHG2P01859 326 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 ZNF20P17024 532 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 CNTFRP26992 372 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 PRDX2P32119 198 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 BRS3P32247 399 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 GPM6AP51674 278 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 RPS6KA3P51812 740 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 SLC7A2P52569 658 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 STX1BP61266 288 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 SLC35B1P78383 322 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 CBX3Q13185 183 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 TRAM2Q15035 370 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 SMIM21Q3B7S5 101 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 TEX38Q6PEX7 206 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 ZNF730Q6ZMV8 503 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 DPY19L2P2Q6ZN68 376 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 KCTD8Q6ZWB6 473 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 DCXRQ7Z4W1 244 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 LINC00471Q8N535 108 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 POC1AQ8NBT0 407 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 MYOZ3Q8TDC0 251 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 ZNRF4Q8WWF5 429 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 AQP3Q92482 292 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 STMN2Q93045 179 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 ZNF488Q96MN9 340 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 NABP2Q9BQ15 211 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 SPXQ9BT56 116 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 ROPN1BQ9BZX4 212 aaPredicted RBP5.4□□□□□ -1.54
VCAN-206ENST00000505615 NDEL1Q9GZM8 345 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 TMEM133Q9H2Q1 129 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 ROPN1Q9HAT0 212 aaPredicted RBP5.4□□□□□ -1.54
VCAN-206ENST00000505615 RETNQ9HD89 108 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 ABCB9Q9NP78 766 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 PAPOLBQ9NRJ5 636 aaKnown RBP5.4□□□□□ -1.54
VCAN-206ENST00000505615 LAMP5Q9UJQ1 280 aa5.4□□□□□ -1.54
VCAN-206ENST00000505615 DNAH17Q9UFH2 4485 aa5.4□□□□□ -1.55
VCAN-206ENST00000505615 HSPG2P98160 4391 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FAM90A18PA6NE21 464 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FAM90A16PA6NEW6 464 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 TVP23AA6NH52 213 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FAM90A20PA6NIJ5 464 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FAM90A9PA6NNJ1 464 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FAM90A12PA8MX19 464 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FAM90A5PA8MXJ8 464 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 K7N7A8 449 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 ZNF737O75373 536 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 RENP00797 406 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 IGLV1-47P01700 117 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 HLA-DQA2P01906 255 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 IFNA6P05013 189 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 SPARCP09486 303 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FAM90A15PP0C7V4 464 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FAM90A13PP0C7W8 464 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FAM90A14PP0C7W9 464 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FAM90A24PP0C7X0 464 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 HIST1H1CP16403 213 aaKnown RBP5.39□□□□□ -1.55
VCAN-206ENST00000505615 PYCR1P32322 319 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 OMPP47874 163 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 CX3CR1P49238 355 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 BDH1Q02338 343 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 CFHR3Q02985 330 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FOXE3Q13461 319 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 PNLIPRP3Q17RR3 467 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 AGKQ53H12 422 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 CYBRD1Q53TN4 286 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 HSP90B2PQ58FF3 399 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 CXorf66Q5JRM2 361 aaPredicted RBP5.39□□□□□ -1.55
VCAN-206ENST00000505615 EPGNQ6UW88 154 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 SLC35E3Q7Z769 313 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 LYPD6Q86Y78 171 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 CCDC28AQ8IWP9 274 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 ZDHHC23Q8IYP9 409 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 ZNF676Q8N7Q3 588 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 OR11H1Q8NG94 326 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 OR4C15Q8NGM1 316 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 OR4K13Q8NH42 304 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 SLAMF6Q96DU3 332 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 ZNF714Q96N38 554 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 FNDC11Q9BVV2 318 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 C1orf43Q9BWL3 253 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 RASL12Q9NYN1 266 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 COMMD3-BMI1R4GMX3 469 aa5.39□□□□□ -1.55
VCAN-206ENST00000505615 ZNF732B4DXR9 585 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 ZNF878C9JN71 531 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 LY6LH3BQJ8 138 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 I3L521 148 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 ARPC3O15145 178 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 FGF16O43320 207 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 DEDDO75618 318 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 TPPPO94811 219 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 ELANEP08246 267 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms