RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-253	ENST00000504651	DAPK2	Q9UIK4	370 aa		11.65	□□□□□ -0.54
DDR1-253	ENST00000504651	ZNF222	Q9UK12	451 aa		11.65	□□□□□ -0.54
DDR1-253	ENST00000504651	MPIG6B	O95866	241 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	VSIG8	P0DPA2	414 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	ZNF44	P15621	663 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	PRDX2	P32119	198 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	RPS19	P39019	145 aa	Known RBP	11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	PITPNB	P48739	271 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	RBM11	P57052	281 aa	Known RBP	11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	LMO4	P61968	165 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	IL13RA1	P78552	427 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	IKZF1	Q13422	519 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	IL13RA2	Q14627	380 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	ZNF146	Q15072	292 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	ESCO2	Q56NI9	601 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	OR10K2	Q6IF99	312 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	SPNS3	Q6ZMD2	512 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	ZNF788	Q6ZQV5	615 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	OR2W3	Q7Z3T1	314 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	CD177	Q8N6Q3	437 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	FAM216B	Q8N7L0	139 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	TMEM104	Q8NE00	496 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651		Q8NFD4	153 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	OR51T1	Q8NGJ9	327 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	NDNF	Q8TB73	568 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	FAM3D	Q96BQ1	224 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	TMEM59	Q9BXS4	323 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	DCSTAMP	Q9H295	470 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	LIN7B	Q9HAP6	207 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	KAAG1	Q9UBP8	84 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	ST3GAL6	Q9Y274	331 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651	CEPT1	Q9Y6K0	416 aa		11.64	□□□□□ -0.55
DDR1-253	ENST00000504651		A0A0B4J203	849 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651		A0A1B0GW55	424 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	TMEM14DP	A8MWL7	114 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	SIRPB1	O00241	398 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	SH2D1B	O14796	132 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	TNFRSF13B	O14836	293 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	SIGLEC5	O15389	551 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	NDUFB3	O43676	98 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	CHRM2	P08172	466 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	WNT2	P09544	360 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	DUX4L2	P0CJ85	424 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	DUX4L3	P0CJ86	424 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	DUX4L4	P0CJ87	422 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	DUX4L5	P0CJ88	424 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	DUX4L6	P0CJ89	424 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	DUX4L7	P0CJ90	424 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	SELL	P14151	372 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	AMY2B	P19961	511 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	SEC61A1	P61619	476 aa	Known RBP	11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	GNB2	P62879	340 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	COL10A1	Q03692	680 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	SCN1B	Q07699	218 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	UNC119	Q13432	240 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	NHLRC3	Q5JS37	347 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	IDNK	Q5T6J7	187 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	LINC00596	Q86U02	117 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	CROCCP3	Q8IVE0	287 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	CIART	Q8N365	385 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	ZNF561	Q8N587	486 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	ASCC1	Q8N9N2	400 aa	Known RBP	11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	TMEM185A	Q8NFB2	350 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	KCNG3	Q8TAE7	436 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	MRPS24	Q96EL2	167 aa	Known RBP	11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	SDSL	Q96GA7	329 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	MED30	Q96HR3	178 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	COX4I2	Q96KJ9	171 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	SELENOI	Q9C0D9	397 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	DUX4	Q9UBX2	424 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	CLN8	Q9UBY8	286 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	METRN	Q9UJH8	293 aa		11.63	□□□□□ -0.55
DDR1-253	ENST00000504651	SETX	Q7Z333	2677 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	TMEM272	A0A1B0GTI8	110 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	FAM157A	C9JC47	383 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651		H3BMQ9	156 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	DVL1	O14640	695 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	GEMIN2	O14893	280 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	OR7C1	O76099	320 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	OR2H2	O95918	312 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	SNRPB	P14678	240 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	CPT2	P23786	658 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	GABRR1	P24046	479 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	SPCS2	Q15005	226 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	PDCD1	Q15116	288 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	MPV17L	Q2QL34	196 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	TMEM249	Q2WGJ8	235 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	C2orf76	Q3KRA6	126 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	LRRC10	Q5BKY1	277 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	ZNRF1	Q8ND25	227 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	LGALS14	Q8TCE9	139 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	ST8SIA4	Q92187	359 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	SLC25A46	Q96AG3	418 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651		Q96M66	194 aa		11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	RBM38	Q9H0Z9	239 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	RSL24D1	Q9UHA3	163 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-253	ENST00000504651	MAB21L2	Q9Y586	359 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms