RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 RAB22AQ9UL26 194 aa3.25□□□□□ -1.89
PCDH11X-208ENST00000504220 MRPS28Q9Y2Q9 187 aaKnown RBP3.25□□□□□ -1.89
PCDH11X-208ENST00000504220 COA3Q9Y2R0 106 aaPredicted RBP3.25□□□□□ -1.89
PCDH11X-208ENST00000504220 MYOFQ9NZM1 2061 aa3.25□□□□□ -1.89
PCDH11X-208ENST00000504220 CHD7Q9P2D1 2997 aa3.25□□□□□ -1.89
PCDH11X-208ENST00000504220 A0A1B0GTH9 108 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TRDV1A0A1B0GX56 115 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 HMGB3O15347 200 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MPPED1O15442 326 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 DKK1O94907 266 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CD74P04233 296 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 HIST1H1CP16403 213 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 RBMS1P29558 406 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ZNF93P35789 620 aaPredicted RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 PRLHRP49683 370 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CLDN17P56750 224 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MRPS10P82664 201 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 PLGLAQ15195 96 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TMEM182Q6ZP80 229 aaPredicted RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SSX7Q7RTT5 188 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 BAGE3Q86Y29 109 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 BAGE2Q86Y30 109 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MKXQ8IYA7 352 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CMTM4Q8IZR5 234 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 C17orf78Q8N4C9 275 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CCDC71LQ8N9Z2 235 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 OR56B1Q8NGI3 324 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 OR2T27Q8NH04 317 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CCL4L1Q8NHW4 92 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 RNF141Q8WVD5 230 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 FGF14Q92915 247 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 PINX1Q96BK5 328 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CMBLQ96DG6 245 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 C5orf30Q96GV9 206 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SPIN2AQ99865 258 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SPIN2BQ9BPZ2 258 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SLC25A31Q9H0C2 315 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ZNF552Q9H707 407 aaPredicted RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 UBQLN4Q9NRR5 601 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 LRIT1Q9P2V4 623 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ZNF629Q9UEG4 869 aaPredicted RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 A4GNTQ9UNA3 340 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CAMK2AQ9UQM7 478 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 EXOGQ9Y2C4 368 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 PTRH2Q9Y3E5 179 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ZNF337Q9Y3M9 751 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CSAG2Q9Y5P2 127 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 GREB1Q4ZG55 1949 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 C2orf16Q68DN1 1984 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 LOC102724200A0A096LPH7 203 aaPredicted RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 A0A0D9SG52 128 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 A0A1W2PR80 420 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 RNF222A6NCQ9 220 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 NRG2O14511 850 aaPredicted RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 DUX1O43812 170 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 DUS4LO95620 317 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 NTN1O95631 604 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MT-ND4LP03901 98 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TK1P04183 234 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MMP2P08253 660 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CR2P20023 1033 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 HNRNPA2B1P22626 353 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 HTR1FP30939 366 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 FABP6P51161 128 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 POLR2HP52434 150 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MVDP53602 400 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ERVK11-1P61568 191 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 RPS27AP62979 156 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 UBA52P62987 128 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ARL6IP1Q15041 203 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 AGERQ15109 404 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TAF9Q16594 264 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ALKBH6Q3KRA9 238 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 XKR7Q5GH72 579 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 OR4A47Q6IF82 309 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TMEM71Q6P5X7 295 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 GLIPR1L1Q6UWM5 242 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SAXO1Q8IYX7 474 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 C10orf111Q8N326 155 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ZNF485Q8NCK3 441 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 OR51A4Q8NGJ6 313 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 OR51A2Q8NGJ7 313 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SPTSSAQ969W0 71 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 RPUSD4Q96CM3 377 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 DOCK7Q96N67 2140 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 OR8B4Q96RC9 309 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MS4A8Q9BY19 250 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MED29Q9NX70 200 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 KIAA1549LQ6ZVL6 1849 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 OBSL1O75147 1896 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ANAPC1Q9H1A4 1944 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 DOCK8Q8NF50 2099 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 A0A1W2PNR3 127 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SERINC4A6NH21 518 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 M0R143 59 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 KLK8O60259 260 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TUSC2O75896 110 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 AQP8O94778 261 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TBX6O95947 436 aaPredicted RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MT-ATP6P00846 226 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms