RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 PCSK4Q6UW60 755 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 NCCRP1Q6ZVX7 275 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-210ENST00000498259 HOGA1Q86XE5 327 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 C1orf87Q8N0U7 546 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 OR10AD1Q8NGE0 317 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 OR5H2Q8NGV7 314 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 SNAPC3Q92966 411 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 PLPPR2Q96GM1 343 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 MED30Q96HR3 178 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 NRIP2Q9BQI9 281 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 ST6GALNAC5Q9BVH7 336 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 SEBOXQ9HB31 216 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-210ENST00000498259 MSL2Q9HCI7 577 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 CHMP1AQ9HD42 196 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-210ENST00000498259 RAB9BQ9NP90 201 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 DECR2Q9NUI1 292 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 ZNF701Q9NV72 531 aaPredicted RBP7.19□□□□□ -1.26
SF3A1-210ENST00000498259 SLC2A8Q9NY64 477 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 FZR1Q9UM11 496 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 KCNK7Q9Y2U2 307 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 ATMQ13315 3056 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 ZGRF1Q86YA3 2104 aa7.19□□□□□ -1.26
SF3A1-210ENST00000498259 hCG_2014768A0A024R1R8 64 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 A0A1W2PP11 408 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 FUOMA2VDF0 154 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 FOXI3A8MTJ6 420 aaPredicted RBP7.18□□□□□ -1.26
SF3A1-210ENST00000498259 F5H5P2 479 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 MLNRO43193 412 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 SYNGR1O43759 233 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 LILRA1O75019 489 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 PEX14O75381 377 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 NDUFB6O95139 128 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 KNG1P01042 644 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 MT-ND4P03905 459 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 CD3DP04234 171 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 TRAPPC2P0DI81 140 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 TRAPPC2BP0DI82 140 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 ZNF44P15621 663 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 GNLYP22749 145 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 GLRA1P23415 457 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 HLA-DMAP28067 261 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 NPBWR2P48146 333 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 SNU13P55769 128 aaKnown RBP7.18□□□□□ -1.26
SF3A1-210ENST00000498259 TNFAIP6P98066 277 aaPredicted RBP7.18□□□□□ -1.26
SF3A1-210ENST00000498259 ZNF146Q15072 292 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 CDK10Q15131 360 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 EFNB3Q15768 340 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 KCNJ8Q15842 424 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 PIGYQ3MUY2 71 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 PLA1AQ53H76 456 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 VAX1Q5SQQ9 334 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 METTL11BQ5VVY1 283 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 SHEQ5VZ18 495 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 MOB1BQ7L9L4 216 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 C6orf201Q7Z4U5 140 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 BPIFB2Q8N4F0 458 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 BEST4Q8NFU0 473 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 OR5AP2Q8NGF4 316 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 FAM222BQ8WU58 562 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 NUDCD2Q8WVJ2 157 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 DHRS9Q9BPW9 319 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 SYT3Q9BQG1 590 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 OCEL1Q9H607 264 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 ZNF286AQ9HBT8 521 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 DYNLRB1Q9NP97 96 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 NUDT15Q9NV35 164 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 NECAP2Q9NVZ3 263 aa7.18□□□□□ -1.26
SF3A1-210ENST00000498259 RCC2Q9P258 522 aaKnown RBP7.18□□□□□ -1.26
SF3A1-210ENST00000498259 SPTA1P02549 2419 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 A0A0A6YYD4 124 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 PIGBOS1A0A0B4J2F0 54 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 UBE2QL1A1L167 161 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 NKX2-6A6NCS4 301 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 MEIS3P1A6NDR6 274 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 C17orf100A8MU93 164 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 SPRY3O43610 288 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 CD55P08174 381 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 PTHLHP12272 177 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 GLP1RP43220 463 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 TAS2R31P59538 309 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 ERVK11-1P61568 191 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 SNRPD2P62316 118 aaKnown RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 GUCA2AQ02747 115 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 MAB21L1Q13394 359 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 SURF2Q15527 256 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 ADIPOQQ15848 244 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 TATDN3Q17R31 274 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 AGAP6Q5VW22 663 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 SFRP4Q6FHJ7 346 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 ADAM5Q6NVV9 412 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 IDO2Q6ZQW0 420 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 Q6ZS49 121 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 RNF144BQ7Z419 303 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 BIVMQ86UB2 503 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 ZDHHC22Q8N966 263 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 OR4C16Q8NGL9 310 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 OR6F1Q8NGZ6 308 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 LILRB1Q8NHL6 650 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 GCDHQ92947 438 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms