RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 C3orf56Q8N813 242 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 LY6G5BQ8NDX9 201 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 LHX4Q969G2 390 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 TMEM203Q969S6 136 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 MUL1Q969V5 352 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 GAFA1Q96PS6 74 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 DCTN5Q9BTE1 182 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 NDUFB11Q9NX14 153 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 IGHV1-69DA0A0B4J2H0 117 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 CENPVL3A0A0U1RRI6 287 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 PQLC2LA1A4F0 135 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 CCRL2O00421 344 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 IGHV1-69P01742 117 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 RNASE1P07998 156 aaKnown RBP12.64□□□□□ -0.39
NUP50-219ENST00000497960 PSG2P11465 335 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 FSTP19883 344 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 CAV3P56539 151 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 INSL4Q14641 139 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 DGUOKQ16854 277 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 DEFB112Q30KQ8 113 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 ACSM3Q53FZ2 586 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 RUSC1-AS1Q66K80 236 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 POC1AQ8NBT0 407 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 C8orf46Q8TAG6 207 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 SPSB1Q96BD6 273 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 ORAI1Q96D31 301 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 C1orf147Q96MC9 270 aaPredicted RBP12.64□□□□□ -0.39
NUP50-219ENST00000497960 DERL3Q96Q80 235 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 NOX4Q9NPH5 578 aa12.64□□□□□ -0.39
NUP50-219ENST00000497960 IGKV1D-17A0A075B6S4 117 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 TRBV5-7A0A0A0MS05 114 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 IGKV1-9A0A0C4DH69 117 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 MDFIC2A0A1B0GVS7 189 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 A0A1W2PPK0 400 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 MAGEB3O15480 346 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 SYNGR1O43759 233 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 TFF1P04155 84 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 SMIM18P0DKX4 95 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 HKR1P10072 659 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 CFPP27918 469 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 POU3F4P49335 361 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 RBP2P50120 134 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 CAPZA1P52907 286 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 ATP1B3P54709 279 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 GP2P55259 537 aaKnown RBP12.63□□□□□ -0.39
NUP50-219ENST00000497960 FOXL1Q12952 345 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 ACP7Q6ZNF0 438 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 VMO1Q7Z5L0 202 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 KIR3DL3Q8N743 410 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 DNAAF1Q8NEP3 725 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 TMEM185AQ8NFB2 350 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 OR51A2Q8NGJ7 313 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 RFT1Q96AA3 541 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 CPNE2Q96FN4 548 aaPredicted RBP12.63□□□□□ -0.39
NUP50-219ENST00000497960 MRPS26Q9BYN8 205 aaKnown RBP12.63□□□□□ -0.39
NUP50-219ENST00000497960 PRDM13Q9H4Q3 707 aa12.63□□□□□ -0.39
NUP50-219ENST00000497960 A0A1W2PQ09 198 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 MAGEA13PA6NCF6 341 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 RFPL4AA6NLU0 287 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 RFPL4AL1F8VTS6 287 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 GABRPO00591 440 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 HOXA3O43365 443 aaPredicted RBP12.62□□□□□ -0.39
NUP50-219ENST00000497960 NOS1APO75052 506 aaPredicted RBP12.62□□□□□ -0.39
NUP50-219ENST00000497960 NXPH2O95156 264 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 PGA5P0DJD9 388 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 SYT6Q5T7P8 510 aaPredicted RBP12.62□□□□□ -0.39
NUP50-219ENST00000497960 DDI2Q5TDH0 399 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 ASPHD2Q6ICH7 369 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 CEACAM19Q7Z692 300 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 ZNRF1Q8ND25 227 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 SDSLQ96GA7 329 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 ZNF488Q96MN9 340 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 SPACA5Q96QH8 159 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 NRIP2Q9BQI9 281 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 PKIBQ9C010 78 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 ZNF222Q9UK12 451 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 SF3B6Q9Y3B4 125 aaKnown RBP12.62□□□□□ -0.39
NUP50-219ENST00000497960 MAB21L2Q9Y586 359 aa12.62□□□□□ -0.39
NUP50-219ENST00000497960 FBN3Q75N90 2809 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 IGKV1-27A0A075B6S5 117 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 TRAV8-7A0A075B6U6 113 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 TRBV23-1A0A0A0MS06 115 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 TRIM64CA6NLI5 447 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 SC5DO75845 299 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 MPZP25189 248 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 BDKRB2P30411 391 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 MTCP1P56278 107 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 FABP5Q01469 135 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 GUCA2AQ02747 115 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 BLMHQ13867 455 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 HSD17B12Q53GQ0 312 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 FAM27D1Q5T7N8 215 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 C16orf87Q6PH81 154 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 Q6YL49 198 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 ANGPTL5Q86XS5 388 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 PDZD9Q8IXQ8 264 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 ZNF561Q8N587 486 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 OR5D18Q8NGL1 313 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 GPER1Q99527 375 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms