RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 A6NJY4 79 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 SPRY1O43609 319 aaPredicted RBP9.46□□□□□ -0.9
HLA-B-254ENST00000497377 KDM4BO94953 1096 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 TMEM225BP0DP42 221 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 SELLP14151 372 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 MMP9P14780 707 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 FSTP19883 344 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 CAPZA1P52907 286 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 ZP1P60852 638 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 RPS11P62280 158 aaKnown RBP eCLIP9.46□□□□□ -0.9
HLA-B-254ENST00000497377 GPR50Q13585 617 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 ZNF146Q15072 292 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 KLF17Q5JT82 389 aaPredicted RBP9.46□□□□□ -0.9
HLA-B-254ENST00000497377 GPR157Q5UAW9 335 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 C1orf122Q6ZSJ8 110 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 C9orf139Q6ZV77 190 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 BPIFB2Q8N4F0 458 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 MS4A15Q8N5U1 240 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 PXT1Q8NFP0 134 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 OR5D13Q8NGL4 314 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 RFT1Q96AA3 541 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 SPACA5Q96QH8 159 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 JMJD8Q96S16 334 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 GPER1Q99527 375 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 SIRPDQ9H106 197 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 HMG20AQ9NP66 347 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 ISYNA1Q9NPH2 558 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 TAS2R4Q9NYW5 299 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 OR14J1Q9UGF5 321 aa9.46□□□□□ -0.9
HLA-B-254ENST00000497377 LSM2Q9Y333 95 aaKnown RBP9.46□□□□□ -0.9
HLA-B-254ENST00000497377 TRBV5-7A0A0A0MS05 114 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 TRAV40A0A0B4J280 105 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 PNMA8CA0A1B0GUJ8 204 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 A0A1W2PQ09 198 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 F8VVB4 439 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 F8VWA3 439 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 K7N7A8 449 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 M0R1W7 72 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 DENRO43583 198 aaKnown RBP9.45□□□□□ -0.9
HLA-B-254ENST00000497377 MRPS14O60783 128 aaKnown RBP9.45□□□□□ -0.9
HLA-B-254ENST00000497377 HAND1O96004 215 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 TFF1P04155 84 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 TK1P04183 234 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 PRKACAP17612 351 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 IGFBP3P17936 291 aaPredicted RBP9.45□□□□□ -0.9
HLA-B-254ENST00000497377 BCL3P20749 454 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 BDKRB2P30411 391 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 NPBWR2P48146 333 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 ARF6P62330 175 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 COL10A1Q03692 680 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 BLMHQ13867 455 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 MED22Q15528 200 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 ASPHD2Q6ICH7 369 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 CRIP3Q6Q6R5 217 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 CDH26Q8IXH8 852 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 FGFRL1Q8N441 504 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 OR51A2Q8NGJ7 313 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 OR5D18Q8NGL1 313 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 OR13C5Q8NGS8 318 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 TMEM158Q8WZ71 300 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 SNX22Q96L94 193 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 PCGF1Q9BSM1 259 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 YTHDF1Q9BYJ9 559 aaKnown RBP9.45□□□□□ -0.9
HLA-B-254ENST00000497377 MS4A7Q9GZW8 240 aaPredicted RBP9.45□□□□□ -0.9
HLA-B-254ENST00000497377 RBFOX1Q9NWB1 397 aaKnown RBP9.45□□□□□ -0.9
HLA-B-254ENST00000497377 ONECUT1Q9UBC0 465 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 FOXJ3Q9UPW0 622 aa9.45□□□□□ -0.9
HLA-B-254ENST00000497377 IGKV1-12A0A0C4DH73 117 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 SH2D1BO14796 132 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 ANGPTL7O43827 346 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 ZNF737O75373 536 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 INMTO95050 263 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 IGKV1D-12P01611 117 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 EEF1B2P24534 225 aaKnown RBP9.44□□□□□ -0.9
HLA-B-254ENST00000497377 ZNF93P35789 620 aaPredicted RBP9.44□□□□□ -0.9
HLA-B-254ENST00000497377 PTGFRP43088 359 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 MTNR1BP49286 362 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 CEBPDP49716 269 aaPredicted RBP9.44□□□□□ -0.9
HLA-B-254ENST00000497377 GABARAPL2P60520 117 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 RPL31P62899 125 aaKnown RBP9.44□□□□□ -0.9
HLA-B-254ENST00000497377 TNP2Q05952 138 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 DOC2BQ14184 412 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 TRAM1Q15629 374 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 TBCEQ15813 527 aaPredicted RBP9.44□□□□□ -0.9
HLA-B-254ENST00000497377 DDI2Q5TDH0 399 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 ELP2Q6IA86 826 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 METAP1DQ6UB28 335 aaPredicted RBP9.44□□□□□ -0.9
HLA-B-254ENST00000497377 RBMS3Q6XE24 437 aaKnown RBP9.44□□□□□ -0.9
HLA-B-254ENST00000497377 SATL1Q86VE3 508 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 OR8H2Q8N162 312 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 BATF2Q8N1L9 274 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 ASCC1Q8N9N2 400 aaKnown RBP9.44□□□□□ -0.9
HLA-B-254ENST00000497377 OR52N4Q8NGI2 321 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 PPP1R35Q8TAP8 253 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 ZFAND2BQ8WV99 257 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 SGCDQ92629 289 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 UFD1Q92890 307 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 DERL3Q96Q80 235 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 OR14A2Q96R54 314 aa9.44□□□□□ -0.9
HLA-B-254ENST00000497377 OR5M11Q96RB7 305 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms