RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 HTR1DP28221 377 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 BRS3P32247 399 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 CEBPDP49716 269 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 CDC42P60953 191 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 ACTA2P62736 377 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 ACTG2P63267 376 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 ACTC1P68032 377 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 ACTA1P68133 377 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 TMED1Q13445 227 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 BCDIN3DQ7Z5W3 292 aaKnown RBP13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 ANGPTL5Q86XS5 388 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 TMEM219Q86XT9 240 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 DNAAF1Q8NEP3 725 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 CAPSLQ8WWF8 208 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 PP6455Q8WZ26 134 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 APOL4Q9BPW4 351 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 OCSTAMPQ9BR26 566 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 ADI1Q9BV57 179 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 CLEC7AQ9BXN2 247 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 LIN7BQ9HAP6 207 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 ADGRL4Q9HBW9 690 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 AURKAIP1Q9NWT8 199 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 WARS2Q9UGM6 360 aaKnown RBP13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 UBE2J1Q9Y385 318 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 ORC6Q9Y5N6 252 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 SYT7O43581 403 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 CYB5AP00167 134 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 PRB2P02812 416 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 HTR1FP30939 366 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 POLR2IP36954 125 aaKnown RBP13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 ALDH3A2P51648 485 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 SLC34A1Q06495 639 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 HABP2Q14520 560 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 SPIN3Q5JUX0 258 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 HIST2H2BDQ6DRA6 164 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 EGFL6Q8IUX8 553 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 ZNF676Q8N7Q3 588 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 OR5AU1Q8NGC0 362 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 TRUB1Q8WWH5 349 aaKnown RBP13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 GPR61Q9BZJ8 451 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 CHST5Q9GZS9 411 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 TMEM133Q9H2Q1 129 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 MTCH1Q9NZJ7 389 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 DPM3Q9P2X0 92 aa13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 MRM2Q9UI43 246 aaKnown RBP13.53□□□□□ -0.24
TRAPPC3-207ENST00000497251 IGHV2-26A0A0B4J1V2 119 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 FAM230AA0A1W2PPH8 454 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 EI24O14681 340 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 MGST3O14880 152 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 CLIC3O95833 236 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 OR2T7P0C7T2 308 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 BLCAPP62952 87 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 SLC35A2P78381 396 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 ZNF146Q15072 292 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 PLA1AQ53H76 456 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 LDLRAD2Q5SZI1 272 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 FOXB2Q5VYV0 432 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 LYG1Q8N1E2 194 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 NDNFQ8TB73 568 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 ZNF596Q8TC21 504 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 RFKQ969G6 155 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 BORCS8Q96FH0 119 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 RCC1LQ96I51 464 aaKnown RBP13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 HRASLS5Q96KN8 279 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 RHOFQ9HBH0 211 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 S100A14Q9HCY8 104 aa13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 TSSC4Q9Y5U2 329 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC3-207ENST00000497251 TRBV2A0A0J9YWF9 115 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 M0QZK8 103 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 HAND1O96004 215 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 PF4V1P10720 104 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 RBP2P50120 134 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 ATP1B3P54709 279 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 BDH1Q02338 343 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 UBE2V2Q15819 145 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 GRK1Q15835 563 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 CENPVQ7Z7K6 275 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 CATSPERDQ86XM0 798 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 YIPF7Q8N8F6 280 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 GAL3ST2Q9H3Q3 398 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 HILPDAQ9Y5L2 63 aa13.51□□□□□ -0.25
TRAPPC3-207ENST00000497251 TMEM82A0PJX8 343 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 METTL15A6NJ78 407 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 E9PQ18 207 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 UBCP0CG48 685 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 PRKACBP22694 351 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 CEACAM3P40198 252 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 DCTN2Q13561 401 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 SLC25A30Q5SVS4 291 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 PLEKHG7Q6ZR37 379 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 SLC25A26Q70HW3 274 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 FAM58AQ8N1B3 248 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 PQLC1Q8N2U9 271 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 CBR4Q8N4T8 237 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 OR4X2Q8NGF9 303 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 TRMT10AQ8TBZ6 339 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 EMG1Q92979 244 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 STMN2Q93045 179 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 IMPAD1Q9NX62 359 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms