RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PHF10Q8WUB8 498 aaKnown RBP2.47□□□□□ -2.01
VPS36-206ENST00000497149 CCDC127Q96BQ5 260 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 CMTM5Q96DZ9 223 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 RNF170Q96K19 258 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 PPP1R36Q96LQ0 422 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 FAM19A4Q96LR4 140 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 RDH12Q96NR8 316 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 CGREF1Q99674 301 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 CIB1Q99828 191 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 PARVBQ9HBI1 364 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 C19orf12Q9NSK7 152 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 STOML2Q9UJZ1 356 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 AP3M1Q9Y2T2 418 aa2.47□□□□□ -2.01
VPS36-206ENST00000497149 POLR3AO14802 1390 aaPredicted RBP2.47□□□□□ -2.01
VPS36-206ENST00000497149 AQRO60306 1485 aaKnown RBP eCLIP2.46□□□□□ -2.02
VPS36-206ENST00000497149 SIGLEC1Q9BZZ2 1709 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 NEURL4Q96JN8 1562 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 HACD1B0YJ81 288 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 LINC01619G3V211 115 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 MKRN2OSH3BPM6 223 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 SLC16A4O15374 487 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 SMIM24O75264 130 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 PSIP1O75475 530 aaKnown RBP2.46□□□□□ -2.02
VPS36-206ENST00000497149 SCO1O75880 301 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 CIAO1O76071 339 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 RPS17P08708 135 aaKnown RBP2.46□□□□□ -2.02
VPS36-206ENST00000497149 CFHR2P36980 270 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 MAGEA6P43360 314 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 ATP5J2P56134 94 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 RPL18AQ02543 176 aaKnown RBP2.46□□□□□ -2.02
VPS36-206ENST00000497149 SLAMF1Q13291 335 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 OR4D1Q15615 310 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 IGFBP7Q16270 282 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 EXOC3L4Q17RC7 722 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 KLHL12Q53G59 568 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 PRSS54Q6PEW0 395 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 TAC4Q86UU9 113 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 SLC30A8Q8IWU4 369 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 CCNYL1Q8N7R7 359 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.46□□□□□ -2.02
VPS36-206ENST00000497149 OR5D18Q8NGL1 313 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 LGALS14Q8TCE9 139 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 KLF14Q8TD94 323 aaPredicted RBP2.46□□□□□ -2.02
VPS36-206ENST00000497149 RNF133Q8WVZ7 376 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 LZICQ8WZA0 190 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 CPB2Q96IY4 423 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 UBE2E2Q96LR5 201 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 ZFP3Q96NJ6 502 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 GPR82Q96P67 336 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 MARVELD1Q9BSK0 173 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 MAP1LC3CQ9BXW4 147 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 SLC22A4Q9H015 551 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 PLEKHF2Q9H8W4 249 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 WDR54Q9H977 334 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 ANKHQ9HCJ1 492 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 MRM2Q9UI43 246 aaKnown RBP2.46□□□□□ -2.02
VPS36-206ENST00000497149 C3orf18Q9UK00 162 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 CES1P1Q9UKY3 287 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 SIGLEC7Q9Y286 467 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 POFUT2Q9Y2G5 429 aa2.46□□□□□ -2.02
VPS36-206ENST00000497149 USP42Q9H9J4 1324 aaKnown RBP2.45□□□□□ -2.02
VPS36-206ENST00000497149 FHAD1B1AJZ9 1412 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 CCL15-CCL14A0A0B4J2E2 113 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 A0A1W2PRF3 423 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 A0A1W2PRM7 423 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 CEACAM18A8MTB9 384 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 C16orf90A8MZG2 172 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 LDOC1O95751 146 aaPredicted RBP2.45□□□□□ -2.02
VPS36-206ENST00000497149 CXCR1P25024 350 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 GTF2H1P32780 548 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 ARR3P36575 388 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 CD79BP40259 229 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 MAGEA3P43357 314 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 GNG10P50151 68 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 OR2B6P58173 313 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 TAS2R43P59537 309 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 ACTBP60709 375 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 CXCR4P61073 352 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 ACTG1P63261 375 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 SPA17Q15506 151 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 CCL15Q16663 113 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 IMPG1Q17R60 797 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 SLC36A2Q495M3 483 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 SDHAF4Q5VUM1 108 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 STEAP4Q687X5 459 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 SPOPLQ6IQ16 392 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 C3orf33Q6P1S2 294 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 ASCL4Q6XD76 172 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 SMIM15Q7Z3B0 74 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 SLC51BQ86UW2 128 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 GID4Q8IVV7 300 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 DAW1Q8N136 415 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 STK40Q8N2I9 435 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 OR5B17Q8NGF7 314 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 OR6N2Q8NGY6 317 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 RXFP2Q8WXD0 754 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 S100PBPQ96BU1 408 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 SERPINB11Q96P15 392 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 EBNA1BP2Q99848 306 aaKnown RBP2.45□□□□□ -2.02
VPS36-206ENST00000497149 DHX35Q9H5Z1 703 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms