RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 SIGLEC6O43699 453 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 TMPRSS11DO60235 418 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 HOXD4P09016 255 aaPredicted RBP5.24□□□□□ -1.57
USF3-204ENST00000496826 PRICKLE4Q2TBC4 344 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 CXorf66Q5JRM2 361 aaPredicted RBP5.24□□□□□ -1.57
USF3-204ENST00000496826 FAM72AQ5TYM5 149 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 PQLC2Q6ZP29 291 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 NPCDR1Q9BY65 106 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 RNF167Q9H6Y7 350 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 ATXN7L1Q9ULK2 861 aaPredicted RBP5.24□□□□□ -1.57
USF3-204ENST00000496826 KLHDC2Q9Y2U9 406 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 KDM5CP41229 1560 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 TCRBV16S1A1N1A0A5B0 115 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 GPR25O00155 361 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 PEX10O60683 326 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 FAM106CPP0CH98 169 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 NECTIN1Q15223 517 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 FAM71CQ8NEG0 241 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 DOK4Q8TEW6 326 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 SMIM19Q96E16 107 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 SERGEFQ9UGK8 458 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 POM121CA8CG34 1229 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 PPIHO43447 177 aaKnown RBP5.24□□□□□ -1.57
USF3-204ENST00000496826 SLC2A10O95528 541 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 HLA-DRB1P01911 266 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 MESP2Q0VG99 397 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 ELAVL1Q15717 326 aaKnown RBP5.24□□□□□ -1.57
USF3-204ENST00000496826 LINC00299Q6ZSB3 139 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 VSIG10LQ86VR7 867 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 ZDHHC23Q8IYP9 409 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 OR10G4Q8NGN3 311 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 EDAQ92838 391 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 SCNM1Q9BWG6 230 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 SDR39U1Q9NRG7 319 aaPredicted RBP5.24□□□□□ -1.57
USF3-204ENST00000496826 ELOVL5Q9NYP7 299 aa5.24□□□□□ -1.57
USF3-204ENST00000496826 SHISA5Q8N114 240 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 TMEM171Q8WVE6 324 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 ZNF778Q96MU6 729 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 LAMTOR2Q9Y2Q5 125 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.23□□□□□ -1.57
USF3-204ENST00000496826 SSSCA1O60232 199 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 AKR7A3O95154 331 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 MPZL1O95297 269 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 GABRA1P14867 456 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 PAX2Q02962 417 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 Q499Y3 187 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 ARSIQ5FYB1 569 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 GTSCR1Q86UQ5 136 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 ATOH7Q8N100 152 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 CACNG8Q8WXS5 425 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 P2RX4Q99571 388 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 PRSS16Q9NQE7 514 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 NTMQ9P121 344 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 LOXHD1Q8IVV2 1947 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 HEATR5BQ9P2D3 2071 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 FAM171A2A8MVW0 826 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 C17orf105B2RV13 164 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 COX6B1P14854 86 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 ACSF3Q4G176 576 aaPredicted RBP5.23□□□□□ -1.57
USF3-204ENST00000496826 DCAF4L2Q8NA75 395 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 OR8A1Q8NGG7 326 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 PATE1Q8WXA2 126 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 PEMTQ9UBM1 199 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 SMARCA4P51532 1647 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 TNFRSF10CO14798 259 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 TGFB1I1O43294 461 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 CKS2P33552 79 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 ID2Q02363 134 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 POU3F1Q03052 451 aaPredicted RBP5.23□□□□□ -1.57
USF3-204ENST00000496826 SLC48A1Q6P1K1 146 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 WDFY1Q8IWB7 410 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 TMEM106BQ9NUM4 274 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 UGGT1Q9NYU2 1555 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 GLRXP35754 106 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 PMELP40967 661 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 MP68P56378 58 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 SIRPAP78324 504 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 MIC13Q5XKP0 118 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 SLC25A34Q6PIV7 304 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 ATG4DQ86TL0 474 aaPredicted RBP5.23□□□□□ -1.57
USF3-204ENST00000496826 P2RY11Q96G91 374 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 TINAGL1Q9GZM7 467 aaPredicted RBP5.23□□□□□ -1.57
USF3-204ENST00000496826 OR51M1Q9H341 326 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 RETNQ9HD89 108 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 ZGRF1Q86YA3 2104 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 BIVM-ERCC5R4GMW8 1640 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 C3orf85A0A1B0GTC6 90 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 A0A1W2PNV4 684 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 HMSDA8MTL9 139 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 ABLIM3O94929 683 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 FKBP1AP62942 108 aaKnown RBP5.23□□□□□ -1.57
USF3-204ENST00000496826 FCRL6Q6DN72 434 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 MEPCEQ7L2J0 689 aaKnown RBP5.23□□□□□ -1.57
USF3-204ENST00000496826 MEGF10Q96KG7 1140 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 MRC1P22897 1456 aa5.23□□□□□ -1.57
USF3-204ENST00000496826 CXorf1O96002 111 aa5.22□□□□□ -1.57
USF3-204ENST00000496826 FAM157BP0CG42 384 aa5.22□□□□□ -1.57
USF3-204ENST00000496826 CEACAM1P13688 526 aa5.22□□□□□ -1.57
USF3-204ENST00000496826 GAGE2BQ13066 116 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms