RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ZNF701M0R085 212 aaPredicted RBP7.3□□□□□ -1.24
U2AF1-212ENST00000496462 GPX5O75715 221 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 IFNA2P01563 188 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 CEACAM3P40198 252 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 ERVFRD-1P60508 538 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 FGF12P61328 243 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 HERV-K104P61576 105 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 FABP5Q01469 135 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 KRTAP27-1Q3LI81 207 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 CHRFAM7AQ494W8 412 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 WDFY1Q8IWB7 410 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 IZUMO1Q8IYV9 350 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 LINC01356Q8N9X3 169 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 OR52N4Q8NGI2 321 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF75AQ96N20 296 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 DCUN1D5Q9BTE7 237 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 AMMECR1Q9Y4X0 333 aaPredicted RBP7.3□□□□□ -1.24
U2AF1-212ENST00000496462 PCNX3Q9H6A9 2034 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 PQLC2LA1A4F0 135 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 IFITM5A6NNB3 132 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 APOA1P02647 267 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 RAB6AP20340 208 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 GZMHP20718 246 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 ACKR3P25106 362 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 DBPQ10586 325 aaPredicted RBP7.3□□□□□ -1.24
U2AF1-212ENST00000496462 GPR157Q5UAW9 335 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 OR51D1Q8NGF3 324 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 OR13F1Q8NGS4 319 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 OR13D1Q8NGV5 346 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 JMJD8Q96S16 334 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 REG4Q9BYZ8 158 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 OR51I2Q9H344 312 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 PATZ1Q9HBE1 687 aaKnown RBP7.3□□□□□ -1.24
U2AF1-212ENST00000496462 GCM1Q9NP62 436 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 RHBDL2Q9NX52 303 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 SF3B6Q9Y3B4 125 aaKnown RBP7.3□□□□□ -1.24
U2AF1-212ENST00000496462 LRBAP50851 2863 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 TRBV5-7A0A0A0MS05 114 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 RFPL4AA6NLU0 287 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 RFPL4AL1F8VTS6 287 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 GYPAP02724 150 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 CD99P14209 185 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 PRRX1P54821 245 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 ACTBP60709 375 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 ACTG1P63261 375 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 IL18Q14116 193 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 FAHD2BQ6P2I3 314 aaPredicted RBP7.3□□□□□ -1.24
U2AF1-212ENST00000496462 DACT3Q96B18 629 aaPredicted RBP7.3□□□□□ -1.24
U2AF1-212ENST00000496462 FAHD2AQ96GK7 314 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 CCL13Q99616 98 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 BEX2Q9BXY8 128 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 SHARPINQ9H0F6 387 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 MMP27Q9H306 513 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 HMG20AQ9NP66 347 aa7.3□□□□□ -1.24
U2AF1-212ENST00000496462 ANKRD17O75179 2603 aaKnown RBP7.3□□□□□ -1.24
U2AF1-212ENST00000496462 NAV3Q8IVL0 2385 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 PDCD6O75340 191 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 NR4A2P43354 598 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 VEGFCP49767 419 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 MMP15P51511 669 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 VBP1P61758 197 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 GUCA2AQ02747 115 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 TAF9Q16594 264 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF826PQ6ZT77 177 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 MYPOPQ86VE0 399 aaPredicted RBP7.29□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF525Q8N782 197 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 NDNFQ8TB73 568 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 LPAR2Q9HBW0 351 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 TAS2R8Q9NYW2 309 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 ACANP16112 2415 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 TACC2O95359 2948 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 TRAV18A0A075B6X5 111 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 SRRM5B3KS81 715 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 H0YL77 283 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 AMY2BP19961 511 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 PRSS3P35030 304 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 RPL31P62899 125 aaKnown RBP7.29□□□□□ -1.24
U2AF1-212ENST00000496462 KRBOX4Q5JUW0 171 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 UBE2NLQ5JXB2 153 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 NCR3LG1Q68D85 454 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 TMEM42Q69YG0 159 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 FAM131AQ6UXB0 335 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 UNQ9370/PRO34162Q6UXP9 181 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 ZCCHC24Q8N2G6 241 aaKnown RBP7.29□□□□□ -1.24
U2AF1-212ENST00000496462 POC5Q8NA72 575 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 OR10K1Q8NGX5 313 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 OR10AC1Q8NH08 325 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 CMTM3Q96MX0 182 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 LSM2Q9Y333 95 aaKnown RBP7.29□□□□□ -1.24
U2AF1-212ENST00000496462 USF3Q68DE3 2245 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 SERPINE3A8MV23 424 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 E9PQ18 207 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 BCL3P20749 454 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 UBE2V2Q15819 145 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 ACP7Q6ZNF0 438 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF295-AS1Q8N0V1 137 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 LYZL4Q96KX0 146 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 MS4A7Q9GZW8 240 aaPredicted RBP7.29□□□□□ -1.24
U2AF1-212ENST00000496462 CHST6Q9GZX3 395 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 POFUT1Q9H488 388 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms