RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 OR8K1Q8NGG5 319 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 ZNF420Q8TAQ5 688 aaPredicted RBP2.37□□□□□ -2.03
CLK1-214ENST00000496205 DTD1Q8TEA8 209 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 BLNKQ8WV28 456 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 FAM104AQ969W3 186 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 ZNF799Q96GE5 643 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 SNF8Q96H20 258 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 PACRGQ96M98 296 aaPredicted RBP2.37□□□□□ -2.03
CLK1-214ENST00000496205 METTL26Q96S19 204 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 SLC22A4Q9H015 551 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 SLC2A9Q9NRM0 540 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 PRO0628Q9UI54 55 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 PSG8Q9UQ74 426 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 PRELID1Q9Y255 219 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 SIGLEC7Q9Y286 467 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.37□□□□□ -2.03
CLK1-214ENST00000496205 SAMHD1Q9Y3Z3 626 aaKnown RBP2.37□□□□□ -2.03
CLK1-214ENST00000496205 WSB1Q9Y6I7 421 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 SCN2AQ99250 2005 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 NRCAMQ92823 1304 aa2.37□□□□□ -2.03
CLK1-214ENST00000496205 ZNF608Q9ULD9 1512 aaPredicted RBP2.37□□□□□ -2.03
CLK1-214ENST00000496205 ADGRL3Q9HAR2 1447 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 RIMS2Q9UQ26 1411 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 TRBV6-6A0A0A6YYG2 114 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 A0A1W2PQL4 384 aaPredicted RBP2.36□□□□□ -2.03
CLK1-214ENST00000496205 EFCAB9A8MZ26 197 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 C21orf140B9A014 251 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 E5RI56 91 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 DNASE2O00115 360 aaPredicted RBP2.36□□□□□ -2.03
CLK1-214ENST00000496205 MANBAO00462 879 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 CXCR6O00574 342 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 TGOLN2O43493 480 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 DENRO43583 198 aaKnown RBP2.36□□□□□ -2.03
CLK1-214ENST00000496205 NDUFS5O43920 106 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 REM1O75628 298 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 ZNF189O75820 626 aaPredicted RBP2.36□□□□□ -2.03
CLK1-214ENST00000496205 CTDNEP1O95476 244 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 TRBV12-3P01733 135 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 BCHEP06276 602 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 MYL12AP19105 171 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 PRSS3P35030 304 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 NDUFA8P51970 172 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 HBG1P69891 147 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 HBG2P69892 147 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 FAM53BQ14153 422 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 PDK2Q15119 407 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 MPPED2Q15777 294 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 SNCBQ16143 134 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 HLA-DRB5Q30154 266 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 FBXL19-AS1Q494R0 122 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 ZNF658BQ4V348 819 aaPredicted RBP2.36□□□□□ -2.03
CLK1-214ENST00000496205 ACTBL2Q562R1 376 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 HES5Q5TA89 166 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 KCTD16Q68DU8 428 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 TNFAIP8L2Q6P589 184 aaPredicted RBP2.36□□□□□ -2.03
CLK1-214ENST00000496205 CLEC19AQ6UXS0 136 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 STK40Q8N2I9 435 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 SLC26A10Q8NG04 563 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 OR5B17Q8NGF7 314 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 RXFP4Q8TDU9 374 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 ABHD3Q8WU67 409 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 SRSF12Q8WXF0 261 aaKnown RBP2.36□□□□□ -2.03
CLK1-214ENST00000496205 EXOSC8Q96B26 276 aaKnown RBP2.36□□□□□ -2.03
CLK1-214ENST00000496205 TESCQ96BS2 214 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 QKIQ96PU8 341 aaKnown RBP eCLIP2.36□□□□□ -2.03
CLK1-214ENST00000496205 TAAR1Q96RJ0 339 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 FAAP24Q9BTP7 215 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 SUCNR1Q9BXA5 334 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 FAM206AQ9NX38 181 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 ADAMTSL3P82987 1691 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 CARMIL3Q8ND23 1372 aa2.36□□□□□ -2.03
CLK1-214ENST00000496205 CDC42BPBQ9Y5S2 1711 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.35□□□□□ -2.03
CLK1-214ENST00000496205 TRAV8-2A0A0B4J237 113 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 A0A0U1RQV1 116 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 TINCRA0A1B0GVN0 87 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 AZIN1O14977 448 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 RP2O75695 350 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 KRT75O95678 551 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 IFNA16P05015 189 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 TLX1NBP0CAT3 122 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 CD99P14209 185 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 CFL1P23528 166 aaKnown RBP2.35□□□□□ -2.03
CLK1-214ENST00000496205 CD70P32970 193 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 RCVRNP35243 200 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 IFNGR2P38484 337 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 CDKN2DP55273 166 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 ERVS71-1P61550 626 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 PRDX1Q06830 199 aaKnown RBP2.35□□□□□ -2.03
CLK1-214ENST00000496205 PPIDQ08752 370 aaKnown RBP2.35□□□□□ -2.03
CLK1-214ENST00000496205 PNOCQ13519 176 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 SPA17Q15506 151 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 PRSS8Q16651 343 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 CLVS2Q5SYC1 327 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 TMEM236Q5W0B7 351 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 CST9Q5W186 159 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 FAM92BQ6ZTR7 304 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 TRAPPC5Q8IUR0 188 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 WDFY1Q8IWB7 410 aa2.35□□□□□ -2.03
CLK1-214ENST00000496205 CCNYL1Q8N7R7 359 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms