RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 MT-ND1P03886 318 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 PRSS2P07478 247 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CST2P09228 141 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CALCBP10092 127 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 FCGR1AP12314 374 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 KITLGP21583 273 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 MSR1P21757 451 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CA6P23280 308 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 ACKR3P25106 362 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 LAP3P28838 519 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CD80P33681 288 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 APLNRP35414 380 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 RBM34P42696 430 aaKnown RBP3.44□□□□□ -1.86
VPS52-222ENST00000495981 GDI2P50395 445 aaKnown RBP3.44□□□□□ -1.86
VPS52-222ENST00000495981 RAG2P55895 527 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 LCN6P62502 163 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CTAG1AP78358 180 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 TNFAIP6P98066 277 aaPredicted RBP3.44□□□□□ -1.86
VPS52-222ENST00000495981 PAX8Q06710 450 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CD47Q08722 323 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 PSG7Q13046 419 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 GAGE5Q13069 117 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 GAGE6Q13070 117 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CYP51A1Q16850 503 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 KRTAP27-1Q3LI81 207 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 ZNF718Q3SXZ3 478 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 ZNF404Q494X3 552 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 MESTQ5EB52 335 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 THEM4Q5T1C6 240 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 FAM27BQ5VT28 67 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 RUSC1-AS1Q66K80 236 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 NCR3LG1Q68D85 454 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 BRD3OSQ6XYD6 125 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 KCTD8Q6ZWB6 473 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 FAM122BQ7Z309 247 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 HDDC2Q7Z4H3 204 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 LRRC28Q86X40 367 aaPredicted RBP3.44□□□□□ -1.86
VPS52-222ENST00000495981 CALHM3Q86XJ0 350 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 ZDHHC21Q8IVQ6 265 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 NKAIN4Q8IVV8 208 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 ZNF383Q8NA42 475 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 OR10AD1Q8NGE0 317 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 OR13C2Q8NGS9 318 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 ITLN1Q8WWA0 313 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 TMIGD2Q96BF3 282 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 C4orf36Q96KX1 117 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CCDC28BQ9BUN5 200 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 ALG12Q9BV10 488 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CHIAQ9BZP6 476 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 SIAEQ9HAT2 523 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CCNB1IP1Q9NPC3 277 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 POLE4Q9NR33 117 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 INIPQ9NRY2 104 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 CTSZQ9UBR2 303 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 OR5V1Q9UGF6 321 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 FOXJ3Q9UPW0 622 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 KLHDC2Q9Y2U9 406 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 MAB21L2Q9Y586 359 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 AUP1Q9Y679 476 aa3.44□□□□□ -1.86
VPS52-222ENST00000495981 TRAV27A0A087WT01 109 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 LCE6AA0A183 80 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 A0A1W2PRG6 482 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 GMNCA6NCL1 334 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 H0YL77 283 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 H3BNX3 289 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 BOLA2-SMG1P6H3BVE0 249 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 FBP2O00757 339 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 IMPA2O14732 288 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 POLR3GO15318 223 aaPredicted RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 TIMM8AO60220 97 aaPredicted RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 SAP30O75446 220 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 SERPINB7O75635 380 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 DFFBO76075 338 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 OR5F1O95221 314 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 FSTL3O95633 263 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 PTHP01270 115 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 MELTFP08582 738 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 WNT2P09544 360 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 COX5BP10606 129 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 UMPSP11172 480 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 CTLA4P16410 223 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 SELEP16581 610 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 GSTM3P21266 225 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 CCNOP22674 350 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 MDH2P40926 338 aaKnown RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 HTR5AP47898 357 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 MAGOHP61326 146 aaKnown RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 BAMBIQ13145 260 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 SRSF9Q13242 221 aaKnown RBP eCLIP3.43□□□□□ -1.86
VPS52-222ENST00000495981 RIPK1Q13546 671 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 MEF2DQ14814 521 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 ZNF181Q2M3W8 571 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 DEFB112Q30KQ8 113 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 SLC36A3Q495N2 470 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 CLEC12AQ5QGZ9 265 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 FAM201AQ5SY85 155 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 OTPQ5XKR4 325 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 TTC33Q6PID6 262 aaPredicted RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 ZNF841Q6ZN19 808 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 ZNF575Q86XF7 245 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms