RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 PDZD9Q8IXQ8 264 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 OR4M1Q8NGD0 313 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 RPS4Y2Q8TD47 263 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 TNFAIP8L1Q8WVP5 186 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 LHX4Q969G2 390 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 DACT3Q96B18 629 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 UPRTQ96BW1 309 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 CPNE2Q96FN4 548 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 SDSLQ96GA7 329 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 OR14A2Q96R54 314 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 OR5M11Q96RB7 305 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 NKX3-1Q99801 234 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 SUCNR1Q9BXA5 334 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 HES4Q9HCC6 221 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 PAK1IP1Q9NWT1 392 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 IL36RNQ9UBH0 155 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 ZNF69Q9UC07 566 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 GLS2Q9UI32 602 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 RAB26Q9ULW5 256 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 GSTK1Q9Y2Q3 226 aa8.59□□□□□ -1.03
TRAPPC12-222ENST00000493792 SIRPB1O00241 398 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 HAND1O96004 215 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 FSHBP01225 129 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 BDKRB2P30411 391 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 SLC35A2P78381 396 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 PRB3Q04118 309 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 BLMHQ13867 455 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 EDDM3AQ14507 147 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 PDCD1Q15116 288 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 C11orf91Q3C1V1 193 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 RBM48Q5RL73 367 aaKnown RBP8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 RUSC1-AS1Q66K80 236 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 GDPD3Q7L5L3 318 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 VMO1Q7Z5L0 202 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 BCL6BQ8N143 479 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 ZSCAN4Q8NAM6 433 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 ZNF485Q8NCK3 441 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 OR52N4Q8NGI2 321 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 PGLYRP3Q96LB9 341 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 NR1H4Q96RI1 486 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 TBX15Q96SF7 602 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 S100A13Q99584 98 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 TMED9Q9BVK6 235 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 CDCA4Q9BXL8 241 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 TMEM138Q9NPI0 162 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 SIRT7Q9NRC8 400 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 BLOC1S6Q9UL45 172 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 ING4Q9UNL4 249 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 KPTNQ9Y664 436 aa8.58□□□□□ -1.04
TRAPPC12-222ENST00000493792 TRBV23-1A0A0A0MS06 115 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 IGKV1-12A0A0C4DH73 117 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 TRBV5-5A0A0J9YX44 114 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 A0A1W2PPH5 198 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 A0A1W2PRD5 423 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 A0A1W2PRF3 423 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 A0A1W2PRM7 423 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 MEX3AA1L020 520 aaKnown RBP8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 SH2D1BO14796 132 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 ALX3O95076 343 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 IGKV1D-12P01611 117 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 TK1P04183 234 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 ZNF44P15621 663 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 CRHBPP24387 322 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 MAPK3P27361 379 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 TGFBR2P37173 567 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 MAP2K4P45985 399 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 OR3A4PP47883 348 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 RPL31P62899 125 aaKnown RBP8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 BDH1Q02338 343 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 RSU1Q15404 277 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 PRR31Q5SQ13 230 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 USP43Q70EL4 1123 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 SAXO1Q8IYX7 474 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 JAGN1Q8N5M9 183 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 SIGLECL1Q8N7X8 197 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 C3orf56Q8N813 242 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 LY6G5BQ8NDX9 201 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 JMJD8Q96S16 334 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 ZNF184Q99676 751 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 CHST6Q9GZX3 395 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 SIRPDQ9H106 197 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 HMG20AQ9NP66 347 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 EXOSC4Q9NPD3 245 aaKnown RBP8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 C19orf12Q9NSK7 152 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 ING3Q9NXR8 418 aa8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 SOX21Q9Y651 276 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC12-222ENST00000493792 PRKDCP78527 4128 aaKnown RBP8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 TRAV8-7A0A075B6U6 113 aa8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 GABRPO00591 440 aa8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 KDM4BO94953 1096 aa8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 CDRT1O95170 752 aa8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 HTR3BO95264 441 aa8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 CSTBP04080 98 aaKnown RBP8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 MAS1P04201 325 aa8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 MMP9P14780 707 aa8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 ZNF93P35789 620 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 DLX1P56177 255 aa8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 ZP1P60852 638 aa8.56□□□□□ -1.04
TRAPPC12-222ENST00000493792 RPS11P62280 158 aaKnown RBP eCLIP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms