RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 HTR2CP28335 458 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 SRP14P37108 136 aaKnown RBP10.19□□□□□ -0.78
UPF3A-210ENST00000493727 GPR6P46095 362 aaPredicted RBP10.19□□□□□ -0.78
UPF3A-210ENST00000493727 OR3A4PP47883 348 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 DVL1P1P54792 670 aaPredicted RBP10.19□□□□□ -0.78
UPF3A-210ENST00000493727 MRPS11P82912 194 aaKnown RBP10.19□□□□□ -0.78
UPF3A-210ENST00000493727 SCGB2A2Q13296 93 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 HAGHLQ6PII5 290 aaPredicted RBP10.19□□□□□ -0.78
UPF3A-210ENST00000493727 ANGPTL5Q86XS5 388 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 ZCCHC24Q8N2G6 241 aaKnown RBP10.19□□□□□ -0.78
UPF3A-210ENST00000493727 OR6M1Q8NGM8 313 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 ZNF671Q8TAW3 534 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 AP3S1Q92572 193 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 RDH5Q92781 318 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 C1orf159Q96HA4 380 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 CCDC140Q96MF4 163 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 GFI1Q99684 422 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 CNTD2Q9H8S5 307 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 FN3KRPQ9HA64 309 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 SAP30LQ9HAJ7 183 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 UFSP2Q9NUQ7 469 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 CCDC59Q9P031 241 aaKnown RBP10.19□□□□□ -0.78
UPF3A-210ENST00000493727 IL19Q9UHD0 177 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 MRPS28Q9Y2Q9 187 aaKnown RBP10.19□□□□□ -0.78
UPF3A-210ENST00000493727 IGKV1-27A0A075B6S5 117 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 A0A0G2JK05 382 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 IFITM5A6NNB3 132 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 J3QT63 122 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 SLC17A2O00624 439 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 TCF21O43680 179 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 CD55P08174 381 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 IRF2P14316 349 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 TNFRSF1AP19438 455 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 TMEM33P57088 247 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 CCL8P80075 99 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 ZNF154Q13106 437 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 MAB21L1Q13394 359 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 P2RY14Q15391 338 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 DGUOKQ16854 277 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 CNPY1Q3B7I2 92 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 GLIPR1L1Q6UWM5 242 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 SLC25A26Q70HW3 274 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 WDR86Q86TI4 376 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 MOGAT3Q86VF5 341 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 GLCCI1Q86VQ1 547 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 DYNC2LI1Q8TCX1 351 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 OR51I2Q9H344 312 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 STEAP1Q9UHE8 339 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 ING4Q9UNL4 249 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 POLDIP2Q9Y2S7 368 aa10.18□□□□□ -0.78
UPF3A-210ENST00000493727 CDIPTO14735 213 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 SPRY1O43609 319 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-210ENST00000493727 ANGPTL7O43827 346 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 SLC2A2P11168 524 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-210ENST00000493727 ZNF182P17025 639 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-210ENST00000493727 IL2RGP31785 369 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 PTGFRP43088 359 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 CLDN12P56749 244 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 PDZK1IP1Q13113 114 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 RSU1Q15404 277 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 C1orf100Q5SVJ3 147 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 RNF144BQ7Z419 303 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 NR2C2APQ86WQ0 139 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 CALHM1Q8IU99 346 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 MKXQ8IYA7 352 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 TEX29Q8N6K0 151 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 SCCPDHQ8NBX0 429 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 OR4D6Q8NGJ1 314 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 OR11L1Q8NGX0 322 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 SLAMF9Q96A28 289 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 PKIBQ9C010 78 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 METTL9Q9H1A3 318 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 SMURF1Q9HCE7 757 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 C1orf123Q9NWV4 160 aa10.17□□□□□ -0.78
UPF3A-210ENST00000493727 A0A0A6YYJ9 748 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 A0A0B4J203 849 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 LRRC30A6NM36 301 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 TRAPPC2LH3BP13 241 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 SYNGR1O43759 233 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 UBBP0CG47 229 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 ARSBP15848 533 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 ECI1P42126 302 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 CAPZA1P52907 286 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 ZP1P60852 638 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 GMFBP60983 142 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 MPPED2Q15777 294 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 SLC22A6Q4U2R8 563 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 MZT2AQ6P582 158 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 ZNF826PQ6ZT77 177 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 BATF2Q8N1L9 274 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 ZSCAN4Q8NAM6 433 aaPredicted RBP10.16□□□□□ -0.78
UPF3A-210ENST00000493727 OR51D1Q8NGF3 324 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 OR51F2Q8NH61 342 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 LGALS14Q8TCE9 139 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 AQP3Q92482 292 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 ERGIC1Q969X5 290 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 FAM3DQ96BQ1 224 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 BARHL1Q9BZE3 327 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 PCDHB16Q9NRJ7 776 aa10.16□□□□□ -0.78
UPF3A-210ENST00000493727 ABRACLQ9P1F3 81 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms