RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 VSIG8P0DPA2 414 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 SLC2A2P11168 524 aaPredicted RBP10.43□□□□□ -0.74
SNX17-208ENST00000493711 SLC25A16P16260 332 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 MGMTP16455 207 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 PRKACAP17612 351 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 SERPINA2P20848 420 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 NPBWR2P48146 333 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 CAV3P56539 151 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 RBM11P57052 281 aaKnown RBP10.43□□□□□ -0.74
SNX17-208ENST00000493711 ZNF146Q15072 292 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 ATPAF1Q5TC12 328 aaPredicted RBP10.43□□□□□ -0.74
SNX17-208ENST00000493711 LRRC28Q86X40 367 aaPredicted RBP10.43□□□□□ -0.74
SNX17-208ENST00000493711 ZNF525Q8N782 197 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 BOLLQ8N9W6 283 aaKnown RBP10.43□□□□□ -0.74
SNX17-208ENST00000493711 CHST4Q8NCG5 386 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 MED30Q96HR3 178 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 TMEM59Q9BXS4 323 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 SPACA1Q9HBV2 294 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 RBFOX1Q9NWB1 397 aaKnown RBP10.43□□□□□ -0.74
SNX17-208ENST00000493711 TREM2Q9NZC2 230 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 SPATA2Q9UM82 520 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 WIPI2Q9Y4P8 454 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 CACNG2Q9Y698 323 aa10.43□□□□□ -0.74
SNX17-208ENST00000493711 A0A075B6Q4 140 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 SMIM30A4D0T7 59 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 NKX6-3A6NJ46 265 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 OR2AT4A6NND4 320 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 LYNX1G3V0Z9 82 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 LDLRAD4O15165 306 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 LY6HO94772 140 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 MPIG6BO95866 241 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 IGHV2-70P01814 119 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 HEXAP06865 529 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 CHRM2P08172 466 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 LYNX1P0DP58 116 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 CD80P33681 288 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 ART1P52961 327 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 RPS27AP62979 156 aaKnown RBP10.42□□□□□ -0.74
SNX17-208ENST00000493711 QRFPP83859 136 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 ARL6IP1Q15041 203 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 ZMYND11Q15326 602 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 CLEC12BQ2HXU8 276 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 MPV17LQ2QL34 196 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 ZNF404Q494X3 552 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 DCDC5Q6ZRR9 648 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 DNM1P46Q6ZS02 220 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 SLC36A1Q7Z2H8 476 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 OR10K1Q8NGX5 313 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 C10orf105Q8TEF2 133 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 RAB40AQ8WXH6 277 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 PHF21AQ96BD5 680 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 ZNF488Q96MN9 340 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 BARHL1Q9BZE3 327 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 WDR13Q9H1Z4 485 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 IFT22Q9H7X7 185 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 MIOXQ9UGB7 285 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 OR5V1Q9UGF6 321 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 ST3GAL6Q9Y274 331 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 AKAP9Q99996 3911 aa10.42□□□□□ -0.74
SNX17-208ENST00000493711 A0A0A6YYH2 397 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 TMEM272A0A1B0GTI8 110 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 ISPDA4D126 451 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 A6NJ64 397 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.41□□□□□ -0.74
SNX17-208ENST00000493711 WNT9BO14905 357 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 GLAP06280 429 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 EGR1P18146 543 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 PRDX2P32119 198 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 CLDN12P56749 244 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 FOXB2Q5VYV0 432 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 STUMQ69YW2 141 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 RAB12Q6IQ22 244 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 NLRC3Q7RTR2 1065 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 OR56B1Q8NGI3 324 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 ANGPTL6Q8NI99 470 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 PPP1R35Q8TAP8 253 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 LGALS14Q8TCE9 139 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 SDSLQ96GA7 329 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 Q96M66 194 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 NKX3-1Q99801 234 aaPredicted RBP10.41□□□□□ -0.74
SNX17-208ENST00000493711 TM2D1Q9BX74 207 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 SELENOIQ9C0D9 397 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 MMP27Q9H306 513 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 ZNF665Q9H7R5 613 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 TMEM165Q9HC07 324 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 KAAG1Q9UBP8 84 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 ADAM30Q9UKF2 790 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 F8P00451 2351 aa10.41□□□□□ -0.74
SNX17-208ENST00000493711 HRNRQ86YZ3 2850 aaPredicted RBP10.4□□□□□ -0.74
SNX17-208ENST00000493711 F8VVB4 439 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 F8VWA3 439 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 DEGS1O15121 323 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 HAND1O96004 215 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 PSG2P11465 335 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 NR4A2P43354 598 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 PITPNBP48739 271 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 GMFBP60983 142 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 IL13RA1P78552 427 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 UNC119Q13432 240 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 C11orf91Q3C1V1 193 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms