RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 AQP3Q92482 292 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 MCHR1Q99705 422 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 SMIM7Q9BQ49 75 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 OR51I2Q9H344 312 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 RAB18Q9NP72 206 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 KIAA1456Q9P272 454 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 IER3IP1Q9Y5U9 82 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 MYOFQ9NZM1 2061 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 CEBPZOSA8MTT3 80 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 PROB1E7EW31 1015 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 ST8SIA3O43173 380 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 KLKB1P03952 638 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 C8AP07357 584 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 DBHP09172 617 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 TSPOP30536 169 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 SRSF7Q16629 238 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS13B-205ENST00000493587 TMEM128Q5BJH2 165 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 KCNIP4Q6PIL6 250 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 CLEC18BQ6UXF7 455 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF788Q6ZQV5 615 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 Q6ZWC4 215 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 SLC38A9Q8NBW4 561 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 LYPD6BQ8NI32 183 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 SUN3Q8TAQ9 357 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 TMEM255BQ8WV15 326 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 LPAR4Q99677 370 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 RNF208Q9H0X6 261 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 C5AR2Q9P296 337 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 ALPK2Q86TB3 2170 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 M0R1X1 148 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF207O43670 478 aaKnown RBP6.04□□□□□ -1.44
VPS13B-205ENST00000493587 ETHE1O95571 254 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 HSPB1P04792 205 aaKnown RBP6.04□□□□□ -1.44
VPS13B-205ENST00000493587 IGLC2P0DOY2 106 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 IGLC3P0DOY3 106 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 ADH5P11766 374 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 RND2P52198 227 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 MRPS34P82930 218 aaKnown RBP6.04□□□□□ -1.44
VPS13B-205ENST00000493587 SSBP1Q04837 148 aaKnown RBP6.04□□□□□ -1.44
VPS13B-205ENST00000493587 TAF10Q12962 218 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF266Q14584 549 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 MSMO1Q15800 293 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 LTC4SQ16873 150 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 SLC39A11Q8N1S5 342 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 OR4N2Q8NGD1 307 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 OR52M1Q8NGK5 317 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 OR4K13Q8NH42 304 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 FGF13Q92913 245 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 TIMP4Q99727 224 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 CHRDL1Q9BU40 450 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 SCRT1Q9BWW7 348 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF703Q9H7S9 590 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-205ENST00000493587 ZDHHC11Q9H8X9 412 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 TMEM38BQ9NVV0 291 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 AHSPQ9NZD4 102 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 CLEC4EQ9ULY5 219 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 ICAM5Q9UMF0 924 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 PSG11Q9UQ72 335 aa6.04□□□□□ -1.44
VPS13B-205ENST00000493587 DOCK9Q9BZ29 2069 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 IGHV1-69-2A0A0G2JMI3 117 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 RCBTB2O95199 551 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 IL2RAP01589 272 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 ADRA2CP18825 462 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 PMCHP20382 165 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 CCKBRP32239 447 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 DUSP2Q05923 314 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 SHBQ15464 509 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 FAM78AQ5JUQ0 283 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 FBXL22Q6P050 247 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF550Q7Z398 422 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-205ENST00000493587 C5orf17Q8NAS9 161 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 PLPP7Q8NBV4 271 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 OR52E2Q8NGJ4 325 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 SPSB1Q96BD6 273 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 ZC2HC1AQ96GY0 325 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 GUCD1Q96NT3 240 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 KLF16Q9BXK1 252 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-205ENST00000493587 ULBP3Q9BZM4 244 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 METTL7AQ9H8H3 244 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 IL21Q9HBE4 155 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 DOCK11Q5JSL3 2073 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 TRBV5-4A0A0C4DH59 114 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-205ENST00000493587 NUPR1O60356 82 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 CKMP06732 381 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 ANOS1P23352 680 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 DUSP1P28562 367 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 APOBEC1P41238 236 aaKnown RBP6.03□□□□□ -1.44
VPS13B-205ENST00000493587 PDLIM4P50479 330 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 RPS11P62280 158 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS13B-205ENST00000493587 LCN6P62502 163 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 ICAM4Q14773 271 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 NSDHLQ15738 373 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 FFAR4Q5NUL3 377 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 TMEM225Q6GV28 225 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 COMMD6Q7Z4G1 85 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 DEFB128Q7Z7B8 93 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 OR1K1Q8NGR3 316 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF417Q8TAU3 575 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms