RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 OR5V1Q9UGF6 321 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 NPTNQ9Y639 398 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 IGHV3OR15-7A0A075B7D8 119 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 SRRM5B3KS81 715 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 CLDN25C9JDP6 229 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 F8VVB4 439 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 F8VWA3 439 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 TMEM178BH3BS89 294 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 NOS1APO75052 506 aaPredicted RBP11.25□□□□□ -0.61
MSH6-208ENST00000493177 GTF2F2P13984 249 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 MRPS11P82912 194 aaKnown RBP11.25□□□□□ -0.61
MSH6-208ENST00000493177 SMIM21Q3B7S5 101 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 ZNF404Q494X3 552 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 FAM201AQ5SY85 155 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 SFRP4Q6FHJ7 346 aaPredicted RBP11.25□□□□□ -0.61
MSH6-208ENST00000493177 OR2W3Q7Z3T1 314 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 PEG10Q86TG7 708 aaKnown RBP11.25□□□□□ -0.61
MSH6-208ENST00000493177 PRIMA1Q86XR5 153 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 OSR2Q8N2R0 312 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 DEFB108BQ8NET1 73 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 OR5H6Q8NGV6 325 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 KCNG3Q8TAE7 436 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 MSI2Q96DH6 328 aaKnown RBP11.25□□□□□ -0.61
MSH6-208ENST00000493177 TMEM59Q9BXS4 323 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 SELENOIQ9C0D9 397 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 WDR13Q9H1Z4 485 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 RASL12Q9NYN1 266 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 IL36GQ9NZH8 169 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 ETV7Q9Y603 341 aa11.25□□□□□ -0.61
MSH6-208ENST00000493177 DYSFO75923 2080 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 PPIAL4EA0A075B759 164 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 TMEM14DPA8MWL7 114 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 PPIAL4DF5H284 164 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 RGS5O15539 181 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 LHBP01229 141 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 ACAA1P09110 424 aaPredicted RBP11.24□□□□□ -0.61
MSH6-208ENST00000493177 PPIAL4FP0DN26 164 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 MGMTP16455 207 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 CFHR2P36980 270 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 FGF12P61328 243 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 ERVK11-1P61568 191 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 ACP7Q6ZNF0 438 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 SAMD12Q8N8I0 201 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 LINC01356Q8N9X3 169 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 TMEM104Q8NE00 496 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 OR51T1Q8NGJ9 327 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 SEH1LQ96EE3 360 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 TIMD4Q96H15 378 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 C1orf147Q96MC9 270 aaPredicted RBP11.24□□□□□ -0.61
MSH6-208ENST00000493177 URM1Q9BTM9 101 aaKnown RBP11.24□□□□□ -0.61
MSH6-208ENST00000493177 SLIRPQ9GZT3 109 aaKnown RBP11.24□□□□□ -0.61
MSH6-208ENST00000493177 RHOFQ9HBH0 211 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 HMG20AQ9NP66 347 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 TMEM160Q9NX00 188 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 OR14J1Q9UGF5 321 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 GLS2Q9UI32 602 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 RAB22AQ9UL26 194 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 SPATA2Q9UM82 520 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 PPIAL4AQ9Y536 164 aa11.24□□□□□ -0.61
MSH6-208ENST00000493177 FN1P02751 2386 aaKnown RBP11.24□□□□□ -0.61
MSH6-208ENST00000493177 CSPG4Q6UVK1 2322 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 MTORP42345 2549 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 ISPDA4D126 451 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 OOEPA6NGQ2 149 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 KIAA1324LA8MWY0 1029 aaPredicted RBP11.23□□□□□ -0.61
MSH6-208ENST00000493177 FAM25AB3EWG3 89 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 FAM25CB3EWG5 89 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 FAM25GB3EWG6 89 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 LGALS8O00214 317 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 HPGDSO60760 199 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 RP2O75695 350 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 GABRR1P24046 479 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 DUSP1P28562 367 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 EFNB2P52799 333 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 SCAND1P57086 179 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 TMEM33P57088 247 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 QRFPP83859 136 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 SCN1BQ07699 218 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 PLA2G7Q13093 441 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 DYNC1I2Q13409 638 aaKnown RBP11.23□□□□□ -0.61
MSH6-208ENST00000493177 UNC119Q13432 240 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 MICBQ29980 383 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 PIGYQ3MUY2 71 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 AVPI1Q5T686 147 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 ELP2Q6IA86 826 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 METAP1DQ6UB28 335 aaPredicted RBP11.23□□□□□ -0.61
MSH6-208ENST00000493177 IL17RELQ6ZVW7 336 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 OR5T2Q8NGG2 359 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 CLDND2Q8NHS1 167 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 RAB1CQ92928 201 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 ATG5Q9H1Y0 275 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 HES4Q9HCC6 221 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 NLKQ9UBE8 527 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 IL36RNQ9UBH0 155 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 ST3GAL6Q9Y274 331 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 WIPI2Q9Y4P8 454 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 TANC2Q9HCD6 1990 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 MALRD1Q5VYJ5 2156 aa11.23□□□□□ -0.61
MSH6-208ENST00000493177 ZFHX3Q15911 3703 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 A0A075B6Q4 140 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms