RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 GABRR1P24046 479 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 ISL1P61371 349 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 DYNC1I2Q13409 638 aaKnown RBP10.08□□□□□ -0.8
COL6A1-205ENST00000492851 GRK1Q15835 563 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 SSX2Q16385 188 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 FDX2Q6P4F2 183 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 BATF2Q8N1L9 274 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 KLHDC1Q8N7A1 406 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 ZNF676Q8N7Q3 588 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 OR2G2Q8NGZ5 317 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 UBE2J1Q9Y385 318 aaPredicted RBP10.08□□□□□ -0.8
COL6A1-205ENST00000492851 SESN1Q9Y6P5 492 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 IGKV1-27A0A075B6S5 117 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 LOC107986453A0A1B0GWG9 222 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 TMEM82A0PJX8 343 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 F8VVB4 439 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 F8VWA3 439 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 SLC16A6O15403 523 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 APOL3O95236 402 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 VSIG10L2P0DP72 767 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 ATF1P18846 271 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 AZGP1P25311 298 aaKnown RBP10.07□□□□□ -0.8
COL6A1-205ENST00000492851 ARHGDIBP52566 201 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 SNRPGP62308 76 aaKnown RBP10.07□□□□□ -0.8
COL6A1-205ENST00000492851 ACTA2P62736 377 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 ACTG2P63267 376 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 ZNF85Q03923 595 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 MRPL28Q13084 256 aaKnown RBP10.07□□□□□ -0.8
COL6A1-205ENST00000492851 PDZK1IP1Q13113 114 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 LHFPL4Q7Z7J7 247 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 RTN4RL2Q86UN3 420 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 Q8N2B8 174 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 ACBD7Q8N6N7 88 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 CREB3L1Q96BA8 519 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 FGGYQ96C11 551 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 AKR1E2Q96JD6 320 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 HRASLS5Q96KN8 279 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 Q96MT0 163 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 OPALINQ96PE5 141 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 MBOAT4Q96T53 435 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 NKX3-1Q99801 234 aaPredicted RBP10.07□□□□□ -0.8
COL6A1-205ENST00000492851 CLEC7AQ9BXN2 247 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 TMEM133Q9H2Q1 129 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 GAL3ST2Q9H3Q3 398 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 FRRS1LQ9P0K9 344 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.07□□□□□ -0.8
COL6A1-205ENST00000492851 HHLA2Q9UM44 414 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 SIGLEC9Q9Y336 463 aa10.07□□□□□ -0.8
COL6A1-205ENST00000492851 MEGF11A6BM72 1044 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 A6NDX4 124 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 F2RL2O00254 374 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 CHST1O43916 411 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 MPZL2O60487 215 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 MT-ND2P03891 347 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 HTR1AP08908 422 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 LMO1P25800 156 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 HTR1DP28221 377 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 BRS3P32247 399 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 ZNF91Q05481 1191 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 EDDM3AQ14507 147 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 TP53I3Q53FA7 332 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 ZFP1Q6P2D0 407 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 C16orf82Q7Z2V1 217 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 TRAPPC6BQ86SZ2 158 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 SAXO1Q8IYX7 474 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 RDH10Q8IZV5 341 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 OR4S1Q8NGB4 309 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 ZNF596Q8TC21 504 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 HAVCR2Q8TDQ0 301 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 CORO2AQ92828 525 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 RNFT2Q96EX2 444 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 CPNE2Q96FN4 548 aaPredicted RBP10.06□□□□□ -0.8
COL6A1-205ENST00000492851 HMG20AQ9NP66 347 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 EXOSC4Q9NPD3 245 aaKnown RBP10.06□□□□□ -0.8
COL6A1-205ENST00000492851 TAS2R3Q9NYW6 316 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 FOXJ3Q9UPW0 622 aa10.06□□□□□ -0.8
COL6A1-205ENST00000492851 TRGV10A0A0A0MS01 117 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 IGHV2-26A0A0B4J1V2 119 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 IGKV1-9A0A0C4DH69 117 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 SAC3D1A6NKF1 404 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 H3BSH0 61 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 J3QRE1 110 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 XPNPEP2O43895 674 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 ENTPD6O75354 484 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 FBXO24O75426 580 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 INMTO95050 263 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 ALX3O95076 343 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 ALPLP05186 524 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 PRKACAP17612 351 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 BCL3P20749 454 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 CEACAM3P40198 252 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 KIR3DL2P43630 455 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 NPBWR2P48146 333 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 POU3F4P49335 361 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 RAB13P51153 203 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 ALDH3A2P51648 485 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 P2RX3P56373 397 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 SLC34A1Q06495 639 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 KPNB1Q14974 876 aaKnown RBP10.05□□□□□ -0.8
COL6A1-205ENST00000492851 ARSJQ5FYB0 599 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms