RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	SLC1A7	O00341	560 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	RTL8C	O15255	209 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	GYG2	O15488	501 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF254	O75437	659 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	CYB5A	P00167	134 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	GAST	P01350	101 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	LYN	P07948	512 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	RPSA	P08865	295 aa	Known RBP	4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	ACAA1	P09110	424 aa	Predicted RBP	4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	OCM2	P0CE71	109 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	OCM	P0CE72	109 aa	Predicted RBP	4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	IGHV1-8	P0DP01	117 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	ANXA8	P13928	327 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	ATP6V1B2	P21281	511 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	CALB2	P22676	271 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	BRS3	P32247	399 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	PYCR1	P32322	319 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	RPS27	P42677	84 aa	Known RBP	4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	GABRA2	P47869	451 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	CX3CR1	P49238	355 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	GSK3A	P49840	483 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	ARHGDIB	P52566	201 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	ESRRG	P62508	458 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	RPL31	P62899	125 aa	Known RBP	4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	CSNK2B	P67870	215 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF92	Q03936	586 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF616	Q08AN1	781 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	RIPPLY1	Q0D2K3	151 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	IL18R1	Q13478	541 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	GFOD2	Q3B7J2	385 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	KLHL12	Q53G59	568 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	TMEM200B	Q69YZ2	307 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	DEGS2	Q6QHC5	323 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	WDR82	Q6UXN9	313 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	CD300LD	Q6UXZ3	194 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	CFAP77	Q6ZQR2	320 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	FAM57B	Q71RH2	274 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	ERI1	Q8IV48	349 aa	Known RBP	4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	FOXRED2	Q8IWF2	684 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	C11orf53	Q8IXP5	236 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	STPG2	Q8N412	459 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	SLC37A3	Q8NCC5	494 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	CCDC197	Q8NCU1	140 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	OR11H6	Q8NGC7	330 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	OR51L1	Q8NGJ5	315 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	OR6N2	Q8NGY6	317 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	PIGC	Q92535	297 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	RNF170	Q96K19	258 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	OR4C12	Q96R67	309 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	DGCR6L	Q9BY27	220 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	WDR13	Q9H1Z4	485 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	C1orf21	Q9H246	121 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	OR51V1	Q9H2C8	321 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	KRT84	Q9NSB2	600 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602	LRP12	Q9Y561	859 aa		4.14	□□□□□ -1.75
SEC13-219	ENST00000492602		A0A0J9YWU9	116 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	TMEM269	A0A1B0GVZ9	245 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	DHRS12	A0PJE2	317 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	SNTN	A6NMZ2	147 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	C16orf90	A8MZG2	172 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	EPM2A	B3EWF7	344 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	CDIPT	O14735	213 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	CNIH1	O95406	144 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	SPI1	P17947	270 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	GNG3	P63215	75 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	GPR50	Q13585	617 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF273	Q14593	569 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	SMIM21	Q3B7S5	101 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	CEACAM21	Q3KPI0	293 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	DNAL1	Q4LDG9	190 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	SLC35D3	Q5M8T2	416 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	GLYATL3	Q5SZD4	288 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF684	Q5T5D7	378 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	MINOS1	Q5TGZ0	78 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	SLC16A9	Q7RTY1	509 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	SLC35E3	Q7Z769	313 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	WDR86	Q86TI4	376 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	CATSPERD	Q86XM0	798 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF573	Q86YE8	665 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF645	Q8N7E2	425 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	OR10G2	Q8NGC3	310 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	OR4M1	Q8NGD0	313 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	OR56B2P	Q8NGI1	322 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	OR5A2	Q8NGI9	324 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	OR10Z1	Q8NGY1	313 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	OR2AE1	Q8NHA4	323 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	ANGPTL6	Q8NI99	470 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNRF4	Q8WWF5	429 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	ARPC1A	Q92747	370 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	DLX4	Q92988	240 aa	Predicted RBP	4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	UTP4	Q969X6	686 aa	Known RBP	4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	SGK3	Q96BR1	496 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	ASB9	Q96DX5	294 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	MRPL48	Q96GC5	212 aa	Known RBP	4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms