RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 HIKESHIQ53FT3 197 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 PDSS1Q5T2R2 415 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 RPL7L1Q6DKI1 246 aaKnown RBP10.74□□□□□ -0.69
HMGN1-220ENST00000492280 ASB13Q8WXK3 278 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 SPRY4Q9C004 299 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 PRSS50Q9UI38 385 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 FAM74A7A6NL05 159 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 AGPAT2O15120 278 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 FARS2O95363 451 aaKnown RBP10.74□□□□□ -0.69
HMGN1-220ENST00000492280 IFNA2P01563 188 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 ASCL1P50553 236 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 HOXA4Q00056 320 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-220ENST00000492280 FAM74A3Q4VXF1 159 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 HES3Q5TGS1 186 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 HSD17B13Q7Z5P4 300 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-220ENST00000492280 FAM117AQ9C073 453 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 SHARPINQ9H0F6 387 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 RAB18Q9NP72 206 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.74□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF292O60281 2723 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 GPR31O00270 319 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 DNPH1O43598 174 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 TNFSF15O95150 251 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 NXPH3O95157 252 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 AIMP2Q13155 320 aaKnown RBP10.73□□□□□ -0.69
HMGN1-220ENST00000492280 GGNBP1Q5YKI7 109 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 MEX3BQ6ZN04 569 aaKnown RBP10.73□□□□□ -0.69
HMGN1-220ENST00000492280 DBX2Q6ZNG2 339 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 LHFPL2Q6ZUX7 228 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 LYZL2Q7Z4W2 148 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 C17orf78Q8N4C9 275 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 HPSE2Q8WWQ2 592 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 CPNE2Q96FN4 548 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-220ENST00000492280 FAM173AQ9BQD7 235 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF552Q9H707 407 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-220ENST00000492280 FAM96BQ9Y3D0 163 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 ADGRG4Q8IZF6 3080 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 INTS1Q8N201 2190 aaKnown RBP10.73□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF708P17019 499 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 M6PRP20645 277 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 TSC22D1Q15714 1073 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 NSUN5P2Q63ZY6 315 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 TMEM42Q69YG0 159 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 PRSS54Q6PEW0 395 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 BAP18Q8IXM2 172 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 IL22RA1Q8N6P7 574 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 UBALD1Q8TB05 177 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 LRRC46Q96FV0 321 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 C2orf50Q96LR7 162 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 PARPBPQ9NWS1 579 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 SLC7A11Q9UPY5 501 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 STARD10Q9Y365 291 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 ROS1P08922 2347 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 KMT2EQ8IZD2 1858 aa10.73□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF816-ZNF321PA0A0X1KG74 233 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 BET1O15155 118 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 SELEP16581 610 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 ADCYAP1P18509 176 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 NME2P22392 152 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 PRKACBP22694 351 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 MEOX1P50221 254 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 OR8B8Q15620 311 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 Q6ZSR3 168 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-220ENST00000492280 RTN4IP1Q8WWV3 396 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-220ENST00000492280 HRH4Q9H3N8 390 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 MED9Q9NWA0 146 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 TRAV39A0A0B4J263 110 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 ARGFXA6NJG6 315 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 KRBOX1C9JBD0 128 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 SYNGR1O43759 233 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 MT-CO3P00414 261 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF728P0DKX0 622 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 RBM11P57052 281 aaKnown RBP10.72□□□□□ -0.69
HMGN1-220ENST00000492280 PRDX4Q13162 271 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 ABCA11PQ4W5N1 156 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 RNFT1Q5M7Z0 435 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 TMEM88Q6PEY1 159 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 MYPOPQ86VE0 399 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-220ENST00000492280 SGPP2Q8IWX5 399 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 SUMF1Q8NBK3 374 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 LHFPL5Q8TAF8 219 aa10.72□□□□□ -0.69
HMGN1-220ENST00000492280 PTPRZ1P23471 2315 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-220ENST00000492280 LRP3O75074 770 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 TPT1P13693 172 aaKnown RBP10.71□□□□□ -0.69
HMGN1-220ENST00000492280 RAB1AP62820 205 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 KRTAP27-1Q3LI81 207 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 RIPPLY2Q5TAB7 128 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 TMEM164Q5U3C3 297 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 GCNT2Q8N0V5 402 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 NEK7Q8TDX7 302 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 ERGIC1Q969X5 290 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 SLC2A9Q9NRM0 540 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 CRYM-AS1A6NIL9 109 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF705EA8MWA4 302 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-220ENST00000492280 TERTO14746 1132 aaKnown RBP10.71□□□□□ -0.69
HMGN1-220ENST00000492280 AADACP22760 399 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 FUT6P51993 359 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 PCBD1P61457 104 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 FAM189A2Q15884 450 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms