RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 BTG1P62324 171 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 HIST2H2BCQ6DN03 193 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 CMTM4Q8IZR5 234 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 OR6Q1Q8NGQ2 317 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 SLC25A38Q96DW6 304 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 LURAP1Q96LR2 239 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 NEDD4LQ96PU5 975 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 GAL3ST1Q99999 423 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 KCNK15Q9H427 330 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 TREM2Q9NZC2 230 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 CACNG2Q9Y698 323 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
SNX12-205ENST00000490561 A0A1W2PP11 408 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.11□□□□□ -0.63
SNX12-205ENST00000490561 CTDSP2O14595 271 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 WNT9BO14905 357 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 DEGS1O15121 323 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 PPIHO43447 177 aaKnown RBP11.11□□□□□ -0.63
SNX12-205ENST00000490561 XRCC3O43542 346 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 HAND1O96004 215 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 EIF4EP06730 217 aaKnown RBP11.11□□□□□ -0.63
SNX12-205ENST00000490561 ELK1P19419 428 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 GIFP27352 417 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 NR4A2P43354 598 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 GPR6P46095 362 aaPredicted RBP11.11□□□□□ -0.63
SNX12-205ENST00000490561 EFNB2P52799 333 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 GMFBP60983 142 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 IKZF1Q13422 519 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 DEFB113Q30KQ7 82 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 PIGYQ3MUY2 71 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 TMEM155Q4W5P6 130 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 ATPAF1Q5TC12 328 aaPredicted RBP11.11□□□□□ -0.63
SNX12-205ENST00000490561 STUMQ69YW2 141 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 METAP1DQ6UB28 335 aaPredicted RBP11.11□□□□□ -0.63
SNX12-205ENST00000490561 CLEC2AQ6UVW9 174 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 LAX1Q8IWV1 398 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 SPICQ8N5J4 248 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 OR10R2Q8NGX6 335 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 PPP1R35Q8TAP8 253 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 DIRAS2Q96HU8 199 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 PIMREGQ9BSJ6 248 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 WDR13Q9H1Z4 485 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 MIXL1Q9H2W2 232 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 LIME1Q9H400 295 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 HSF4Q9ULV5 492 aa11.11□□□□□ -0.63
SNX12-205ENST00000490561 C3orf80F5H4A9 247 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 GEMIN2O14893 280 aaKnown RBP11.1□□□□□ -0.63
SNX12-205ENST00000490561 SSX4O60224 188 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 PDCD6O75340 191 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 OR7C1O76099 320 aaPredicted RBP11.1□□□□□ -0.63
SNX12-205ENST00000490561 IGHV2-70P01814 119 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 PSG2P11465 335 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 FUT3P21217 361 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 GABRR1P24046 479 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 PTBP1P26599 531 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNX12-205ENST00000490561 PRDX2P32119 198 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 MNDAP41218 407 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 KCNJ3P48549 501 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 VEGFCP49767 419 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 RBM39Q14498 530 aaKnown RBP11.1□□□□□ -0.63
SNX12-205ENST00000490561 CARTPTQ16568 116 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 TAF9Q16594 264 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 SPANXN2Q5MJ10 180 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 DCDC5Q6ZRR9 648 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 SLC36A1Q7Z2H8 476 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 BATF2Q8N1L9 274 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 ZNF561Q8N587 486 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 ANGPTL6Q8NI99 470 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 S100ZQ8WXG8 99 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 NRGNQ92686 78 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 PERPQ96FX8 193 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 SDSLQ96GA7 329 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 MED30Q96HR3 178 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 ZNF665Q9H7R5 613 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 RCC2Q9P258 522 aaKnown RBP11.1□□□□□ -0.63
SNX12-205ENST00000490561 EXTL2Q9UBQ6 330 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 OR14J1Q9UGF5 321 aa11.1□□□□□ -0.63
SNX12-205ENST00000490561 DYSFO75923 2080 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 RFPL4AA6NLU0 287 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 RFPL4AL1F8VTS6 287 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 LYNX1G3V0Z9 82 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 RAB27BO00194 218 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 NDUFS7O75251 213 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 GSTP1P09211 210 aaKnown RBP11.09□□□□□ -0.63
SNX12-205ENST00000490561 LYNX1P0DP58 116 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 ZNF44P15621 663 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 CDK2P24941 298 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 LMO1P25800 156 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 BLVRBP30043 206 aaPredicted RBP11.09□□□□□ -0.63
SNX12-205ENST00000490561 TNFSF8P32971 234 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 ETV6P41212 452 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 SNU13P55769 128 aaKnown RBP11.09□□□□□ -0.63
SNX12-205ENST00000490561 PITPNAQ00169 270 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 PLA2G7Q13093 441 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 ZMYND11Q15326 602 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 TMEM69Q5SWH9 247 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 SFRP4Q6FHJ7 346 aaPredicted RBP11.09□□□□□ -0.63
SNX12-205ENST00000490561 Q6P435 159 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 CNIH2Q6PI25 160 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms