RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ACTR3BQ9P1U1 418 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 IL36RNQ9UBH0 155 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 IKZF2Q9UKS7 526 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 A0A1B0GTI1 187 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 LOC110117498-PIK3R3F6TDL0 507 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 M0QZK8 103 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 PSPNO60542 156 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 SRSF10O75494 262 aaKnown RBP11.05□□□□□ -0.64
VARS-227ENST00000489979 ZFPL1O95159 310 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 HAND1O96004 215 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 OR3A4PP47883 348 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 BCL2L15Q5TBC7 163 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 SLX4IPQ5VYV7 408 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 RTN4RL2Q86UN3 420 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 EGFL6Q8IUX8 553 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 DEFB107AQ8IZN7 70 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 KLHL30-AS1Q8NEE0 82 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 GIPC3Q8TF64 312 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 EMG1Q92979 244 aaKnown RBP11.05□□□□□ -0.64
VARS-227ENST00000489979 NOL4LQ96MY1 436 aaPredicted RBP11.05□□□□□ -0.64
VARS-227ENST00000489979 PRR25Q96S07 402 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 OR52A1Q9UKL2 312 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 SLC7A11Q9UPY5 501 aa11.05□□□□□ -0.64
VARS-227ENST00000489979 UBE2J1Q9Y385 318 aaPredicted RBP11.05□□□□□ -0.64
VARS-227ENST00000489979 IGKV1-27A0A075B6S5 117 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 ARRDC5A6NEK1 342 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 IGLV1-47P01700 117 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 CDK2P24941 298 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 SLC6A1P30531 599 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 CDK5Q00535 292 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 ZNF91Q05481 1191 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 SPATS1Q496A3 300 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 CASC10Q5T4H9 136 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 TPTE2P1Q5T6R2 138 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 OR52W1Q6IF63 320 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 PLEKHG7Q6ZR37 379 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 ELMOD2Q8IZ81 293 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 ASB17Q8WXJ9 295 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 DUX3Q96PT4 197 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 MOB1AQ9H8S9 216 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 ZFP57Q9NU63 452 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 MOB4Q9Y3A3 225 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 R4GMQ9 66 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 HSPE1-MOB4S4R3N1 261 aa11.04□□□□□ -0.64
VARS-227ENST00000489979 CCDC182A6NF36 153 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 DHRS7CA6NNS2 312 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 MGST3O14880 152 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 MAGEB4O15481 346 aaPredicted RBP11.03□□□□□ -0.64
VARS-227ENST00000489979 SNRNP70P08621 437 aaKnown RBP11.03□□□□□ -0.64
VARS-227ENST00000489979 DUSP1P28562 367 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 GDNFP39905 211 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 LUMP51884 338 aaPredicted RBP11.03□□□□□ -0.64
VARS-227ENST00000489979 P2RX3P56373 397 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 RAB25P57735 213 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 UBE2V2Q15819 145 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 FAM98BQ52LJ0 330 aaKnown RBP11.03□□□□□ -0.64
VARS-227ENST00000489979 C16orf89Q6UX73 402 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 HEPN1Q6WQI6 88 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 Q6ZSR3 168 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 SLC25A26Q70HW3 274 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 MUC7Q8TAX7 377 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 CHPT1Q8WUD6 406 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 LYSTQ99698 3801 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 APOL4Q9BPW4 351 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 SEBOXQ9HB31 216 aaPredicted RBP11.03□□□□□ -0.64
VARS-227ENST00000489979 ZNF286AQ9HBT8 521 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 LINC00527Q9UJ94 153 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 TMEM14AQ9Y6G1 99 aa11.03□□□□□ -0.64
VARS-227ENST00000489979 LY6LH3BQJ8 138 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 H3BSH0 61 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 BUB1B-PAK6H3BSN5 160 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 TOR1AO14656 332 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 ATP8B1O43520 1251 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 E2F6O75461 281 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 FAM106CPP0CH98 169 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 OSMP13725 252 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 CD34P28906 385 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 ERP29P30040 261 aaKnown RBP11.02□□□□□ -0.65
VARS-227ENST00000489979 CEACAM3P40198 252 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 MNDAP41218 407 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 OR3A1P47881 315 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 NPBWR2P48146 333 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 SNU13P55769 128 aaKnown RBP11.02□□□□□ -0.65
VARS-227ENST00000489979 HLA-DRB5Q30154 266 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 TMEM236Q5W0B7 351 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 CCDC144NLQ6NUI1 221 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 ZNF322Q6U7Q0 402 aaPredicted RBP11.02□□□□□ -0.65
VARS-227ENST00000489979 TMEM179BQ7Z7N9 219 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 ZNF695Q8IW36 515 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 ENTHD1Q8IYW4 607 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 CREB3L1Q96BA8 519 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 RAX2Q96IS3 184 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 GAL3ST2Q9H3Q3 398 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 ARL8BQ9NVJ2 186 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 RBFOX1Q9NWB1 397 aaKnown RBP11.02□□□□□ -0.65
VARS-227ENST00000489979 TAGLN3Q9UI15 199 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 GLS2Q9UI32 602 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 SNX5Q9Y5X3 404 aa11.02□□□□□ -0.65
VARS-227ENST00000489979 TRGV10A0A0A0MS01 117 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 SERPINE3A8MV23 424 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms