RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 OR8B2Q96RD0 313 aa1.59□□□□□ -2.15
CCDC39-206ENST00000489868 MYCBPQ99417 103 aaPredicted RBP1.59□□□□□ -2.15
CCDC39-206ENST00000489868 MRPL16Q9NX20 251 aaKnown RBP1.59□□□□□ -2.15
CCDC39-206ENST00000489868 OR5V1Q9UGF6 321 aa1.59□□□□□ -2.15
CCDC39-206ENST00000489868 PSIP1O75475 530 aaKnown RBP1.58□□□□□ -2.16
CCDC39-206ENST00000489868 PSMD4P55036 377 aaKnown RBP1.58□□□□□ -2.16
CCDC39-206ENST00000489868 HIKESHIQ53FT3 197 aa1.58□□□□□ -2.16
CCDC39-206ENST00000489868 SLC35D2Q76EJ3 337 aa1.58□□□□□ -2.16
CCDC39-206ENST00000489868 HS3ST5Q8IZT8 346 aa1.58□□□□□ -2.16
CCDC39-206ENST00000489868 OR51A7Q8NH64 312 aa1.58□□□□□ -2.16
CCDC39-206ENST00000489868 NDNFQ8TB73 568 aa1.58□□□□□ -2.16
CCDC39-206ENST00000489868 LMX1AQ8TE12 382 aa1.58□□□□□ -2.16
CCDC39-206ENST00000489868 MAL2Q969L2 176 aa1.58□□□□□ -2.16
CCDC39-206ENST00000489868 SHCBP1LQ9BZQ2 653 aa1.58□□□□□ -2.16
CCDC39-206ENST00000489868 RBM12B-AS1Q9P1G2 102 aa1.58□□□□□ -2.16
CCDC39-206ENST00000489868 FADS3Q9Y5Q0 445 aa1.58□□□□□ -2.16
CCDC39-206ENST00000489868 HELZ2Q9BYK8 2649 aaKnown RBP1.58□□□□□ -2.16
CCDC39-206ENST00000489868 OR5AL1P0C617 328 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 GZMHP20718 246 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 CRABP2P29373 138 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 CSKP41240 450 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 RPL31P62899 125 aaKnown RBP1.57□□□□□ -2.16
CCDC39-206ENST00000489868 SLC35B1P78383 322 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 TOMM34Q15785 309 aaPredicted RBP1.57□□□□□ -2.16
CCDC39-206ENST00000489868 PIP5KL1Q5T9C9 394 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 DPPA2Q7Z7J5 298 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 QKIQ96PU8 341 aaKnown RBP eCLIP1.57□□□□□ -2.16
CCDC39-206ENST00000489868 TSNAXQ99598 290 aaKnown RBP1.57□□□□□ -2.16
CCDC39-206ENST00000489868 COA1Q9GZY4 146 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 RHOFQ9HBH0 211 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 C6orf50Q9HD87 102 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 SLC7A11Q9UPY5 501 aa1.57□□□□□ -2.16
CCDC39-206ENST00000489868 TRGV4A0A0C4DH28 118 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 A0A1W2PRF3 423 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 A0A1W2PRM7 423 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 A6NED7 52 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 M0R1B8 84 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 GYG2O15488 501 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 COX7A2P2O60397 106 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 HLA-AP01891 365 aaKnown RBP1.56□□□□□ -2.16
CCDC39-206ENST00000489868 HOXB8P17481 243 aaPredicted RBP1.56□□□□□ -2.16
CCDC39-206ENST00000489868 P2RY2P41231 377 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 HTR2BP41595 481 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 DAOAP59103 153 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 BCL2A1Q16548 175 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 ZNF322Q6U7Q0 402 aaPredicted RBP1.56□□□□□ -2.16
CCDC39-206ENST00000489868 TCF23Q7RTU1 214 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 OR6K6Q8NGW6 343 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 ZNF436Q9C0F3 470 aaPredicted RBP1.56□□□□□ -2.16
CCDC39-206ENST00000489868 IQCGQ9H095 443 aaKnown RBP1.56□□□□□ -2.16
CCDC39-206ENST00000489868 SHANK3Q9BYB0 1731 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 ADGRB3O60242 1522 aa1.56□□□□□ -2.16
CCDC39-206ENST00000489868 OR2AT4A6NND4 320 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 CENPXA8MT69 81 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 SLC37A4O43826 429 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 OPN1SWP03999 348 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 RLN2P04090 185 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 TAC1P20366 129 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 IVDP26440 423 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 CCT6AP40227 531 aaKnown RBP1.55□□□□□ -2.16
CCDC39-206ENST00000489868 IFFO1Q0D2I5 559 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 ZNF773Q6PK81 442 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 Q6ZRU5 148 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 LYZL2Q7Z4W2 148 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 MARCH3Q86UD3 253 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 ZNF738Q8NE65 137 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 OR2M3Q8NG83 312 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.55□□□□□ -2.16
CCDC39-206ENST00000489868 ZNF286AQ9HBT8 521 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 CFL2Q9Y281 166 aa1.55□□□□□ -2.16
CCDC39-206ENST00000489868 A0A1B0GTQ1 180 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 PLEKHA8P1O95397 391 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 PSG4Q00888 419 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 TMEM215Q68D42 235 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 C22orf15Q8WYQ4 148 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 PYURFQ96I23 114 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 RILPQ96NA2 401 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 YPEL4Q96NS1 127 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 TSSK6Q9BXA6 273 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 SLC38A1Q9H2H9 487 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 TUBA4BQ9H853 241 aa1.54□□□□□ -2.16
CCDC39-206ENST00000489868 LOC100653049A0A140TA62 436 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 KRT34O76011 436 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 MLNP12872 115 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 GTF2F2P13984 249 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 M6PRP20645 277 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 CNTFRP26992 372 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 NOS1P29475 1434 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 ATP6V1FQ16864 119 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 Q499Y3 187 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 TTMPQ5BVD1 217 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 PRRC2BQ5JSZ5 2229 aaKnown RBP1.53□□□□□ -2.16
CCDC39-206ENST00000489868 NELFCDQ8IXH7 590 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 CHID1Q9BWS9 393 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 TSGA10Q9BZW7 698 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 OR2D2Q9H210 308 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 C12orf4Q9NQ89 552 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 FLVCR2Q9UPI3 526 aa1.53□□□□□ -2.16
CCDC39-206ENST00000489868 NEURL4Q96JN8 1562 aa1.52□□□□□ -2.17
CCDC39-206ENST00000489868 WDR19Q8NEZ3 1342 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms