RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CTDSPLO15194 276 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 Q1RN00 199 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 LGALSLQ3ZCW2 172 aaPredicted RBP15.59■□□□□ 0.09
NPHP4-209ENST00000489180 JMJD6Q6NYC1 403 aaPredicted RBP15.59■□□□□ 0.09
NPHP4-209ENST00000489180 OR6S1Q8NH40 331 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 ZNF707Q96C28 371 aaPredicted RBP15.59■□□□□ 0.09
NPHP4-209ENST00000489180 ZPBPQ9BS86 351 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 TMEM9BQ9NQ34 198 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 MOB1BQ7L9L4 216 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 TGIF2LXQ8IUE1 241 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 LRRC29Q8WV35 223 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 AMDHD2Q9Y303 409 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 ZNF79Q15937 498 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 ETV3LQ6ZN32 361 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 FSCN3Q9NQT6 498 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 CACFD1Q9UGQ2 172 aa15.59■□□□□ 0.09
NPHP4-209ENST00000489180 HLA-DRB3P79483 266 aa15.58■□□□□ 0.09
NPHP4-209ENST00000489180 PSG6Q00889 435 aa15.58■□□□□ 0.09
NPHP4-209ENST00000489180 ACER2Q5QJU3 275 aa15.58■□□□□ 0.09
NPHP4-209ENST00000489180 ADAD2Q8NCV1 583 aaKnown RBP15.58■□□□□ 0.09
NPHP4-209ENST00000489180 ZNF426Q9BUY5 554 aa15.58■□□□□ 0.09
NPHP4-209ENST00000489180 TRBV5-3A0A0A0MS03 114 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 C3orf80F5H4A9 247 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 TMIGD3P0DMS9 266 aaPredicted RBP15.58■□□□□ 0.08
NPHP4-209ENST00000489180 RPL29P47914 159 aaKnown RBP15.58■□□□□ 0.08
NPHP4-209ENST00000489180 ZNF154Q13106 437 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 RPEL1Q2QD12 228 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 GTF2H5Q6ZYL4 71 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 NHLRC2Q8NBF2 726 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 OR1L4Q8NGR5 311 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 OR2I1PQ8NGU4 316 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 RGP1Q92546 391 aaPredicted RBP15.58■□□□□ 0.08
NPHP4-209ENST00000489180 SCN1AP35498 2009 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 OR5H1A6NKK0 313 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 GABRA1P14867 456 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 MEOX2P50222 304 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 OR1A1Q9P1Q5 309 aa15.58■□□□□ 0.08
NPHP4-209ENST00000489180 HSD17B13Q7Z5P4 300 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-209ENST00000489180 TMEM56Q96MV1 263 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 CYB5R1Q9UHQ9 305 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 CBY1Q9Y3M2 126 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 TRAV8-7A0A075B6U6 113 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 GEMIN2O14893 280 aaKnown RBP15.57■□□□□ 0.08
NPHP4-209ENST00000489180 GAMTQ14353 236 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 RNPS1Q15287 305 aaKnown RBP15.57■□□□□ 0.08
NPHP4-209ENST00000489180 ATG4DQ86TL0 474 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-209ENST00000489180 GPR27Q9NS67 375 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 MYO7AQ13402 2215 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 HRASP01112 189 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 GFRALQ6UXV0 394 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 PNPP00491 289 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 S100A4P26447 101 aaKnown RBP15.57■□□□□ 0.08
NPHP4-209ENST00000489180 IGFBP7Q16270 282 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 LIAT1Q6ZQX7 453 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 AAMDCQ9H7C9 122 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 TMEM218A2RU14 115 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 ST8SIA5O15466 376 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 CTSDP07339 412 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-209ENST00000489180 PNLIPP16233 465 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 GPA33Q99795 319 aa15.57■□□□□ 0.08
NPHP4-209ENST00000489180 LRRC3CA6NJW4 275 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 BMPR1BO00238 502 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 CRHP06850 196 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 KLF9Q13886 244 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-209ENST00000489180 IRF3Q14653 427 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 FNDC7Q5VTL7 733 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 KCNAB3O43448 404 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 MDH2P40926 338 aaKnown RBP15.56■□□□□ 0.08
NPHP4-209ENST00000489180 TMEM91Q6ZNR0 172 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 RPS4Y2Q8TD47 263 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 ANXA10Q9UJ72 324 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 GLI3P10071 1580 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 MMP7P09237 267 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-209ENST00000489180 TNFRSF1AP19438 455 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 BCL3P20749 454 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 CAMPP49913 170 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 HES7Q9BYE0 225 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 SLC2A8Q9NY64 477 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 SMIM17P0DL12 118 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 EFNB2P52799 333 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 SPINK14Q6IE38 97 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 DHRS13Q6UX07 377 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 OR2M7Q8NG81 312 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 DYRK2Q92630 601 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 MRPL24Q96A35 216 aaKnown RBP15.56■□□□□ 0.08
NPHP4-209ENST00000489180 SLC45A2Q9UMX9 530 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 KNL1Q8NG31 2342 aa15.56■□□□□ 0.08
NPHP4-209ENST00000489180 LINC01387J3KSC0 135 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 FGF2P09038 288 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 CA10Q9NS85 328 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 STARD10Q9Y365 291 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 NHSQ6T4R5 1651 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 MKRN2OSH3BPM6 223 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 CHST1O43916 411 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 AMTP48728 403 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 NHLH1Q02575 133 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 NHLH2Q02577 135 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 VSTM2LQ96N03 204 aa15.55■□□□□ 0.08
NPHP4-209ENST00000489180 WDR61Q9GZS3 305 aaKnown RBP15.55■□□□□ 0.08
NPHP4-209ENST00000489180 CLEC5AQ9NY25 188 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms