RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 FNDC9Q8TBE3 224 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 C10orf35Q96D05 121 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 SF3B5Q9BWJ5 86 aaKnown RBP10.96□□□□□ -0.65
CLIC4-202ENST00000488683 WFDC1Q9HC57 220 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 APOC1P02654 83 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 MBPP02686 304 aaPredicted RBP10.96□□□□□ -0.66
CLIC4-202ENST00000488683 CST2P09228 141 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 DAOP14920 347 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 ZXDAP98168 799 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 DAZAP2Q15038 168 aaPredicted RBP10.96□□□□□ -0.66
CLIC4-202ENST00000488683 STK11Q15831 433 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 PABPC1L2AQ5JQF8 200 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 FAM122CQ6P4D5 195 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 UQCC3Q6UW78 93 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 WDR5BQ86VZ2 330 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 SGPP2Q8IWX5 399 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 SLAMF9Q96A28 289 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 ADGRG7Q96K78 797 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 SIGLEC12Q96PQ1 595 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 CALHM2Q9HA72 323 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 UQCC1Q9NVA1 299 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 LPAR3Q9UBY5 353 aa10.96□□□□□ -0.66
CLIC4-202ENST00000488683 GTF3C1Q12789 2109 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 TMEM265A0A087WTH1 108 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 TRAV39A0A0B4J263 110 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 K7EPK0 472 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 RRP8O43159 456 aaKnown RBP10.95□□□□□ -0.66
CLIC4-202ENST00000488683 TNFSF12O43508 249 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 CA11O75493 328 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 CHATP28329 748 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 PLA2G5P39877 138 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 RBP2P50120 134 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 AKR1D1P51857 326 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 CCDC36Q8IYA8 594 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 FAM71E2Q8N5Q1 922 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 ADAMTS17Q8TE56 1095 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 RTN4IP1Q8WWV3 396 aaPredicted RBP10.95□□□□□ -0.66
CLIC4-202ENST00000488683 ARL11Q969Q4 196 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 SPSB1Q96BD6 273 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 CNTNAP3BQ96NU0 1288 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 CNTNAP3Q9BZ76 1288 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 FGF23Q9GZV9 251 aaPredicted RBP10.95□□□□□ -0.66
CLIC4-202ENST00000488683 ZNF442Q9H7R0 627 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 ZDHHC8Q9ULC8 765 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 AMDHD2Q9Y303 409 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 SVILO95425 2214 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 CRYM-AS1A6NIL9 109 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 GJE1A6NN92 205 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 TERTO14746 1132 aaKnown RBP10.95□□□□□ -0.66
CLIC4-202ENST00000488683 LILRA1O75019 489 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 ZNF728P0DKX0 622 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 OMGP23515 440 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 HOXA6P31267 233 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 TSC22D1Q15714 1073 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 KRTAP27-1Q3LI81 207 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 ABCA11PQ4W5N1 156 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 ACER2Q5QJU3 275 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 Q6ZRG5 221 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 LINC00696Q6ZRV3 163 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 HSD17B11Q8NBQ5 300 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 SECTM1Q8WVN6 248 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 AKR1E2Q96JD6 320 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 SGCZQ96LD1 299 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 PRRG4Q9BZD6 226 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 OR2H1Q9GZK4 316 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 MAGT1Q9H0U3 335 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 PCDHB16Q9NRJ7 776 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 DECR2Q9NUI1 292 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 C1orf123Q9NWV4 160 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 TCFL5Q9UL49 500 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 TECTAO75443 2155 aa10.95□□□□□ -0.66
CLIC4-202ENST00000488683 PHF1O43189 567 aaPredicted RBP10.94□□□□□ -0.66
CLIC4-202ENST00000488683 NGFP01138 241 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 CTSDP07339 412 aaPredicted RBP10.94□□□□□ -0.66
CLIC4-202ENST00000488683 AADACP22760 399 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 TRA2AQ13595 282 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLIC4-202ENST00000488683 CPT1CQ8TCG5 803 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 CT55Q8WUE5 264 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 TP53RKQ96S44 253 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 AIFM2Q9BRQ8 373 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 GPR35Q9HC97 309 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 COLQQ9Y215 455 aaPredicted RBP10.94□□□□□ -0.66
CLIC4-202ENST00000488683 hCG_38984A0A1B0GV85 526 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 ATXN7O15265 892 aaPredicted RBP10.94□□□□□ -0.66
CLIC4-202ENST00000488683 SFTA3P0C7M3 94 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 GPM6AP51674 278 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 PPA1Q15181 289 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 TMEM42Q69YG0 159 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 ABLIM2Q6H8Q1 611 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 OSR2Q8N2R0 312 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 ZNF611Q8N823 705 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 THOC3Q96J01 351 aaKnown RBP10.94□□□□□ -0.66
CLIC4-202ENST00000488683 SLC2A9Q9NRM0 540 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 SLC7A10Q9NS82 523 aa10.94□□□□□ -0.66
CLIC4-202ENST00000488683 YKT6O15498 198 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 BCL3P20749 454 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 PPT1P50897 306 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 ZNF616Q08AN1 781 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 ARL6IP1Q15041 203 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 TUSC5Q8IXB3 177 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms