RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PROKR2Q8NFJ6 384 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 NT5CQ8TCD5 201 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 ING5Q8WYH8 240 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.63□□□□□ -2.311e-8■■■■■ 268.2
SMC4-219ENST00000487747 RILPQ96NA2 401 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 OR8B2Q96RD0 313 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 TSNAXQ99598 290 aaKnown RBP0.63□□□□□ -2.31
SMC4-219ENST00000487747 SHCBP1LQ9BZQ2 653 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 SRRQ9GZT4 340 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 ARMC7Q9H6L4 198 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 C8orf33Q9H7E9 229 aaPredicted RBP0.63□□□□□ -2.31
SMC4-219ENST00000487747 RHOFQ9HBH0 211 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 DDIT4Q9NX09 232 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 OR5V1Q9UGF6 321 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 DDX19BQ9UMR2 479 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 RABL2BQ9UNT1 228 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 PHLPP2Q6ZVD8 1323 aa0.63□□□□□ -2.31
SMC4-219ENST00000487747 LCTP09848 1927 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 LOC389332A0A1B0GUA5 103 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 OR2AT4A6NND4 320 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 SUPT3HB4E1H0 165 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 M0R1B8 84 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 TRAPPC6AO75865 159 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 PLEKHA8P1O95397 391 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 RHOCP08134 193 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 PMCHP20382 165 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 GZMHP20718 246 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 IMPA1P29218 277 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 COILP38432 576 aaPredicted RBP0.62□□□□□ -2.31
SMC4-219ENST00000487747 P2RY2P41231 377 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 CLDN8P56748 225 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 LCN2P80188 198 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 FOXF1Q12946 379 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 CASP8Q14790 479 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 TMEM241Q24JQ0 296 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 PLCXD3Q63HM9 321 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 GLYATQ6IB77 296 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 CLEC2AQ6UVW9 174 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 Q6ZRU5 148 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 FAM43BQ6ZT52 329 aaPredicted RBP0.62□□□□□ -2.31
SMC4-219ENST00000487747 HS3ST5Q8IZT8 346 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 OR2M3Q8NG83 312 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 GABARAPL1Q9H0R8 117 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 OR2AG1Q9H205 316 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 OR2D2Q9H210 308 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 CLSTN2Q9H4D0 955 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 TUBA4BQ9H853 241 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 PLEKHA1Q9HB21 404 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 ZNF286AQ9HBT8 521 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 ZMAT5Q9UDW3 170 aaKnown RBP0.62□□□□□ -2.31
SMC4-219ENST00000487747 FLVCR2Q9UPI3 526 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 ZNF706Q9Y5V0 76 aaPredicted RBP0.62□□□□□ -2.31
SMC4-219ENST00000487747 OTOFQ9HC10 1997 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 MALRD1Q5VYJ5 2156 aa0.62□□□□□ -2.31
SMC4-219ENST00000487747 A0A0J9YYE9 177 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 FAM240AA0A1B0GVK7 77 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 A0A1W2PRF3 423 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 A0A1W2PRM7 423 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 TRIM64CA6NLI5 447 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 LY6LH3BQJ8 138 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 RGS5O15539 181 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 DHRS3O75911 302 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 PDYNP01213 254 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 TRBC1P01850 177 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 MLNP12872 115 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 IVDP26440 423 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 DAOAP59103 153 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 SLC35B1P78383 322 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 PRB3Q04118 309 aaPredicted RBP0.61□□□□□ -2.31
SMC4-219ENST00000487747 SPAG1Q07617 926 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 BCL2A1Q16548 175 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 Q499Y3 187 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 ATP6AP1LQ52LC2 224 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 PYCR3Q53H96 274 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 IDNKQ5T6J7 187 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 FAM27D1Q5T7N8 215 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 MLIPQ5VWP3 458 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 ANGPTL8Q6UXH0 198 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 ZNF767PQ75MW2 155 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 DPPA2Q7Z7J5 298 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 LINC00596Q86U02 117 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 CCNYL1Q8N7R7 359 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 DNAAF3Q8N9W5 541 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 OR8K1Q8NGG5 319 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 OR6K6Q8NGW6 343 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 RNASE11Q8TAA1 199 aaKnown RBP0.61□□□□□ -2.31
SMC4-219ENST00000487747 C2orf15Q8WU43 125 aaKnown RBP0.61□□□□□ -2.31
SMC4-219ENST00000487747 PIH1D2Q8WWB5 315 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 MAL2Q969L2 176 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 YPEL4Q96NS1 127 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 METTL26Q96S19 204 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 COA1Q9GZY4 146 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 CHRNA10Q9GZZ6 450 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 C6orf50Q9HD87 102 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 MRPL16Q9NX20 251 aaKnown RBP0.61□□□□□ -2.31
SMC4-219ENST00000487747 CCL26Q9Y258 94 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 CFL2Q9Y281 166 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 RHBDD3Q9Y3P4 386 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 ATG2BQ96BY7 2078 aa0.61□□□□□ -2.31
SMC4-219ENST00000487747 COL4A2P08572 1712 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 381.9 ms