RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TMEM82A0PJX8 343 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 SIRPB1O00241 398 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 CCDC159P0C7I6 412 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 TMEM225BP0DP42 221 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 PEX2P28328 305 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 ETV1P50549 477 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 LGALS4P56470 323 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 SRSF4Q08170 494 aaKnown RBP14.41□□□□□ -0.1
COL6A1-204ENST00000486023 ACSM1Q08AH1 577 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 GRK1Q15835 563 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 LY6EQ16553 131 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 TAF9Q16594 264 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 ZNF691Q5VV52 312 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 HCP5Q6MZN7 132 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 SERPINA12Q8IW75 414 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 ZSCAN4Q8NAM6 433 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-204ENST00000486023 SGMS2Q8NHU3 365 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 RDH12Q96NR8 316 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 ZNF649Q9BS31 505 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 FAM234AQ9H0X4 552 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 ING3Q9NXR8 418 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 ZNRD1Q9P1U0 126 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 GLS2Q9UI32 602 aa14.41□□□□□ -0.1
COL6A1-204ENST00000486023 TMEM212A6NML5 194 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 POM121CA8CG34 1229 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 ZNF737O75373 536 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 LIMS3P0CW19 117 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 LIMS4P0CW20 117 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 BMXP51813 675 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 PLA1AQ53H76 456 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 OR2G6Q5TZ20 316 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 TTC23Q5W5X9 447 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 C17orf107Q6ZR85 190 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 SATL1Q86VE3 508 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 Q8IYB0 196 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 DHRSXQ8N5I4 330 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 OR52N4Q8NGI2 321 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 OR5D14Q8NGL3 314 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 SNX22Q96L94 193 aa14.4□□□□□ -0.1
COL6A1-204ENST00000486023 MRPS18AQ9NVS2 196 aaKnown RBP14.4□□□□□ -0.1
COL6A1-204ENST00000486023 IGKV1-12A0A0C4DH73 117 aa14.39□□□□□ -0.11
COL6A1-204ENST00000486023 IGKV1D-12P01611 117 aa14.39□□□□□ -0.11
COL6A1-204ENST00000486023 RPSAP08865 295 aaKnown RBP14.39□□□□□ -0.11
COL6A1-204ENST00000486023 MRPL28Q13084 256 aaKnown RBP14.39□□□□□ -0.11
COL6A1-204ENST00000486023 DYNC1I2Q13409 638 aaKnown RBP14.39□□□□□ -0.11
COL6A1-204ENST00000486023 DHRS7BQ6IAN0 325 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-204ENST00000486023 TMPRSS11AQ6ZMR5 421 aa14.39□□□□□ -0.11
COL6A1-204ENST00000486023 GDPGP1Q6ZNW5 385 aa14.39□□□□□ -0.11
COL6A1-204ENST00000486023 TRAPPC6BQ86SZ2 158 aa14.39□□□□□ -0.11
COL6A1-204ENST00000486023 OR8H2Q8N162 312 aa14.39□□□□□ -0.11
COL6A1-204ENST00000486023 C11orf42Q8N5U0 333 aa14.39□□□□□ -0.11
COL6A1-204ENST00000486023 OR4S1Q8NGB4 309 aa14.39□□□□□ -0.11
COL6A1-204ENST00000486023 NR1H4Q96RI1 486 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-204ENST00000486023 SSX3Q99909 188 aa14.39□□□□□ -0.11
COL6A1-204ENST00000486023 FGF20Q9NP95 211 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-204ENST00000486023 CHCHD3Q9NX63 227 aaKnown RBP14.39□□□□□ -0.11
COL6A1-204ENST00000486023 CLPSL1A2RUU4 121 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 H3BUX3 64 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 SH2D1BO14796 132 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 MAGEB3O15480 346 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 PSPNO60542 156 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 ARG1P05089 322 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 ZNF728P0DKX0 622 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 MYL12AP19105 171 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 DCKP27707 260 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 MIDNQ504T8 468 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 OLFML2AQ68BL7 652 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 XAF1Q6GPH4 301 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 SETD9Q8NE22 299 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 GPER1Q99527 375 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 NKX3-1Q99801 234 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-204ENST00000486023 PPA2Q9H2U2 334 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 HMG20AQ9NP66 347 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 EXOSC4Q9NPD3 245 aaKnown RBP14.38□□□□□ -0.11
COL6A1-204ENST00000486023 CLEC2DQ9UHP7 191 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 VPREB3Q9UKI3 123 aa14.38□□□□□ -0.11
COL6A1-204ENST00000486023 hADV38S2A0JD32 116 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 SULT1B1O43704 296 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 ZNF44P15621 663 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 IL18R1Q13478 541 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 KISS1Q15726 138 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 LHFPL4Q7Z7J7 247 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 PACRGLQ8N7B6 248 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 BEND2Q8NDZ0 799 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 PPP1R35Q8TAP8 253 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 TMEM80Q96HE8 168 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 ZNF714Q96N38 554 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 FAM192AQ9GZU8 254 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 SLITRK2Q9H156 845 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 TAS2R4Q9NYW5 299 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 RNF114Q9Y508 228 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 PCDHGB5Q9Y5G0 923 aa14.37□□□□□ -0.11
COL6A1-204ENST00000486023 A0A1B0GUS0 222 aa14.36□□□□□ -0.11
COL6A1-204ENST00000486023 IRGMA1A4Y4 181 aa14.36□□□□□ -0.11
COL6A1-204ENST00000486023 C17orf98A8MV24 154 aa14.36□□□□□ -0.11
COL6A1-204ENST00000486023 KDM4BO94953 1096 aa14.36□□□□□ -0.11
COL6A1-204ENST00000486023 NDUFA7O95182 113 aa14.36□□□□□ -0.11
COL6A1-204ENST00000486023 OR2H2O95918 312 aa14.36□□□□□ -0.11
COL6A1-204ENST00000486023 MT-ND2P03891 347 aa14.36□□□□□ -0.11
COL6A1-204ENST00000486023 RAB3AP20336 220 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms