RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 IL18R1Q13478 541 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ODF4Q2M2E3 257 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ARSJQ5FYB0 599 aaPredicted RBP5.72□□□□□ -1.49
VPS50-218ENST00000485994 SPIN3Q5JUX0 258 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ZNF691Q5VV52 312 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 RUSC1-AS1Q66K80 236 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ZNF529Q6P280 563 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 RPL22L1Q6P5R6 122 aaKnown RBP5.72□□□□□ -1.49
VPS50-218ENST00000485994 CRIP3Q6Q6R5 217 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 GDPGP1Q6ZNW5 385 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 SLC25A26Q70HW3 274 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 OR8H2Q8N162 312 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 FAM58AQ8N1B3 248 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 DTX3Q8N9I9 347 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ZSCAN4Q8NAM6 433 aaPredicted RBP5.72□□□□□ -1.49
VPS50-218ENST00000485994 BEND2Q8NDZ0 799 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 TMEM185AQ8NFB2 350 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 OR52I1Q8NGK6 324 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 OR5R1Q8NH85 324 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 OR5AK2Q8NH90 309 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 APH1BQ8WW43 257 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 H1FXQ92522 213 aaKnown RBP5.72□□□□□ -1.49
VPS50-218ENST00000485994 CORO2AQ92828 525 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 STMN2Q93045 179 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 AJUBAQ96IF1 538 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ZNF488Q96MN9 340 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ALG8Q9BVK2 526 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 CDCA4Q9BXL8 241 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 CHIAQ9BZP6 476 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 NCOR1P1Q9H4R4 102 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ZCCHC4Q9H5U6 513 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 C16orf95Q9H693 158 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 BEX1Q9HBH7 125 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 HMG20AQ9NP66 347 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 C1RLQ9NZP8 487 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 ZNRD1Q9P1U0 126 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 NKX1-2Q9UD57 310 aaPredicted RBP5.72□□□□□ -1.49
VPS50-218ENST00000485994 AASSQ9UDR5 926 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 FAM96BQ9Y3D0 163 aa5.72□□□□□ -1.49
VPS50-218ENST00000485994 CMYA5Q8N3K9 4069 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 ELOA3CA0A087WX78 387 aaPredicted RBP5.71□□□□□ -1.5
VPS50-218ENST00000485994 A0A0U1RQK1 487 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 MDFIC2A0A1B0GVS7 189 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 CLPSL1A2RUU4 121 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 F8VVB4 439 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 F8VWA3 439 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 H0YAE9 185 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 SH2D1BO14796 132 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 MGST3O14880 152 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 OGG1O15527 345 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 GPX5O75715 221 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 CLPXO76031 633 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 KDM4BO94953 1096 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 BAG2O95816 211 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 TFF1P04155 84 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 ALDOBP05062 364 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 CSN2P05814 226 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 CD1AP06126 327 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 ZNF20P17024 532 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 AZGP1P25311 298 aaKnown RBP5.71□□□□□ -1.5
VPS50-218ENST00000485994 PEX2P28328 305 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 TGFBR2P37173 567 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 BMXP51813 675 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 DLX6P56179 175 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 ERVFRD-1P60508 538 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 COL10A1Q03692 680 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 ELP2Q6IA86 826 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 FIP1L1Q6UN15 594 aaKnown RBP5.71□□□□□ -1.5
VPS50-218ENST00000485994 ASCL4Q6XD76 172 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 TMPRSS11AQ6ZMR5 421 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 C17orf107Q6ZR85 190 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 DHRSXQ8N5I4 330 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 ZNF676Q8N7Q3 588 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 SETD9Q8NE22 299 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 PXT1Q8NFP0 134 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 OR11H6Q8NGC7 330 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 OR51A4Q8NGJ6 313 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 OR4F5Q8NH21 305 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 PPP1R35Q8TAP8 253 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 TRMT10AQ8TBZ6 339 aaKnown RBP5.71□□□□□ -1.5
VPS50-218ENST00000485994 FBLIM1Q8WUP2 373 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 OPALINQ96PE5 141 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 DUX5Q96PT3 197 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 COMMD4Q9H0A8 199 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 ISG20L2Q9H9L3 353 aaKnown RBP5.71□□□□□ -1.5
VPS50-218ENST00000485994 AMBNQ9NP70 447 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 SIRT7Q9NRC8 400 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 C19orf12Q9NSK7 152 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 PLCXD1Q9NUJ7 323 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 BABAM2Q9NXR7 383 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 GLS2Q9UI32 602 aa5.71□□□□□ -1.5
VPS50-218ENST00000485994 DIMT1Q9UNQ2 313 aaKnown RBP5.71□□□□□ -1.5
VPS50-218ENST00000485994 IGKV1-12A0A0C4DH73 117 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 hADV38S2A0JD32 116 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 TMEM82A0PJX8 343 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 FUOMA2VDF0 154 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 VGLL3A8MV65 326 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 E9PI62 339 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 H0YJX3 145 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 SULT1B1O43704 296 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms