RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 RBFOX1Q9NWB1 397 aaKnown RBP20.75■□□□□ 0.91
HLA-F-227ENST00000485513 PITPNC1Q9UKF7 332 aa20.75■□□□□ 0.91
HLA-F-227ENST00000485513 LINC00312Q9Y6C7 94 aa20.75■□□□□ 0.91
HLA-F-227ENST00000485513 IGKV1-9A0A0C4DH69 117 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 TRBV2A0A0J9YWF9 115 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 A6NDX4 124 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 CIB2O75838 187 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 NPBWR2P48146 333 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 MTCP1P56278 107 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 ACTA2P62736 377 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 ACTG2P63267 376 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 ACTC1P68032 377 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 ACTA1P68133 377 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 ZNF91Q05481 1191 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 TMEM219Q86XT9 240 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 FAM58AQ8N1B3 248 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 TPRX1Q8N7U7 411 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 OR52N4Q8NGI2 321 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 CHST6Q9GZX3 395 aa20.74■□□□□ 0.91
HLA-F-227ENST00000485513 OPN1MWP04001 364 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 OPN1MW2P0DN77 364 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 OPN1MW3P0DN78 364 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 ZNF20P17024 532 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 ATF1P18846 271 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 BCL3P20749 454 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 PRKACBP22694 351 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 DUSP1P28562 367 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 OR12D2P58182 307 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 HABP2Q14520 560 aaPredicted RBP20.73■□□□□ 0.91
HLA-F-227ENST00000485513 UTS2BQ765I0 119 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 KCTD20Q7Z5Y7 419 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 Q8N2B8 174 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 ZNF676Q8N7Q3 588 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 FGGYQ96C11 551 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 SESN1Q9Y6P5 492 aa20.73■□□□□ 0.91
HLA-F-227ENST00000485513 A0A0G2JK05 382 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 DAPL1A0PJW8 107 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 PSPNO60542 156 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 ENTPD6O75354 484 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 PRKACAP17612 351 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 AZGP1P25311 298 aaKnown RBP20.72■□□□□ 0.91
HLA-F-227ENST00000485513 ZNF146Q15072 292 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 LHFPL2Q6ZUX7 228 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 RNFT2Q96EX2 444 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 SERTAD4Q9NUC0 356 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 FRRS1LQ9P0K9 344 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 GLS2Q9UI32 602 aa20.72■□□□□ 0.91
HLA-F-227ENST00000485513 PLXNB1O43157 2135 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 MGST3O14880 152 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 ISG15P05161 165 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 CALCBP10092 127 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 DYNLT3P51808 116 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 SNU13P55769 128 aaKnown RBP20.71■□□□□ 0.91
HLA-F-227ENST00000485513 SPIN3Q5JUX0 258 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 MINOS1Q5TGZ0 78 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 FDX2Q6P4F2 183 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 OR4S1Q8NGB4 309 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 HILPDAQ9Y5L2 63 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 ORC6Q9Y5N6 252 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 MINOS1-NBL1R4GNA1 71 aa20.71■□□□□ 0.91
HLA-F-227ENST00000485513 IGHV2-26A0A0B4J1V2 119 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 J3QRE1 110 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 F2RL2O00254 374 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 SLC16A6O15403 523 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 ALPLP05186 524 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 OCM2P0CE71 109 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 OCMP0CE72 109 aaPredicted RBP20.7■□□□□ 0.9
HLA-F-227ENST00000485513 NANOS3P60323 173 aaKnown RBP20.7■□□□□ 0.9
HLA-F-227ENST00000485513 PDZK1IP1Q13113 114 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 SLC25A30Q5SVS4 291 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 NDNFQ8TB73 568 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 PYDC1Q8WXC3 89 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 SPSB1Q96BD6 273 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 HRASLS5Q96KN8 279 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 OPALINQ96PE5 141 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 MBOAT4Q96T53 435 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 PRSS22Q9GZN4 317 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 TMEM133Q9H2Q1 129 aa20.7■□□□□ 0.9
HLA-F-227ENST00000485513 G3V4G9 280 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 FBXO24O75426 580 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 HTR1AP08908 422 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 OR3A1P47881 315 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 SNRPGP62308 76 aaKnown RBP20.69■□□□□ 0.9
HLA-F-227ENST00000485513 SLC34A1Q06495 639 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 MEDAGQ5VYS4 303 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 TRAPPC6BQ86SZ2 158 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 RFT1Q96AA3 541 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 CLEC7AQ9BXN2 247 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 HMG20AQ9NP66 347 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 HHLA2Q9UM44 414 aa20.69■□□□□ 0.9
HLA-F-227ENST00000485513 SIRPB1O00241 398 aa20.68■□□□□ 0.9
HLA-F-227ENST00000485513 JUNBP17275 347 aaPredicted RBP20.68■□□□□ 0.9
HLA-F-227ENST00000485513 ERP29P30040 261 aaKnown RBP20.68■□□□□ 0.9
HLA-F-227ENST00000485513 CCR9P51686 369 aa20.68■□□□□ 0.9
HLA-F-227ENST00000485513 P2RX3P56373 397 aa20.68■□□□□ 0.9
HLA-F-227ENST00000485513 ZBTB49Q6ZSB9 765 aa20.68■□□□□ 0.9
HLA-F-227ENST00000485513 LYG1Q8N1E2 194 aa20.68■□□□□ 0.9
HLA-F-227ENST00000485513 EXOSC4Q9NPD3 245 aaKnown RBP20.68■□□□□ 0.9
HLA-F-227ENST00000485513 GSTK1Q9Y2Q3 226 aa20.68■□□□□ 0.9
HLA-F-227ENST00000485513 UBE2J1Q9Y385 318 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms