RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 OR14J1Q9UGF5 321 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 RAB26Q9ULW5 256 aa14.81□□□□□ -0.04
HDAC6-225ENST00000483506 LSM2Q9Y333 95 aaKnown RBP14.81□□□□□ -0.04
HDAC6-225ENST00000483506 IGHV3OR16-10A0A075B7F0 116 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 PTGES3LE9PB15 166 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 ANGPTL7O43827 346 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 IGFBP3P17936 291 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-225ENST00000483506 COL10A1Q03692 680 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 VMO1Q7Z5L0 202 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 SIGLECL1Q8N7X8 197 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 ZDHHC22Q8N966 263 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 PXT1Q8NFP0 134 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 OR13C5Q8NGS8 318 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 RFT1Q96AA3 541 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 ZNF48Q96MX3 618 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-225ENST00000483506 ESM1Q9NQ30 184 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 ONECUT1Q9UBC0 465 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 IL36RNQ9UBH0 155 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 TPRKBQ9Y3C4 175 aa14.8□□□□□ -0.04
HDAC6-225ENST00000483506 TRBV5-7A0A0A0MS05 114 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 HAND1O96004 215 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 FSTP19883 344 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 VHLP40337 213 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 CAPZA1P52907 286 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 RPL31P62899 125 aaKnown RBP14.79□□□□□ -0.04
HDAC6-225ENST00000483506 OR5D18Q8NGL1 313 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 TBC1D15Q8TC07 691 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 DSCAML1Q8TD84 2053 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 SGCDQ92629 289 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 TNFRSF14Q92956 283 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 C19orf24Q9BVV8 132 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 C19orf12Q9NSK7 152 aa14.79□□□□□ -0.04
HDAC6-225ENST00000483506 ANK2Q01484 3957 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 IGHV1-69DA0A0B4J2H0 117 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 A0A1W2PQ09 198 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 TMEM82A0PJX8 343 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 MAGEB3O15480 346 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 RGS9O75916 674 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-225ENST00000483506 INMTO95050 263 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 IGHV1-69P01742 117 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 PRKACAP17612 351 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 CELP19835 753 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 CRHBPP24387 322 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 PPP3R1P63098 170 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 ELP2Q6IA86 826 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 ASCL4Q6XD76 172 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 BRD3OSQ6XYD6 125 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 OR8H2Q8N162 312 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 Q8NFD4 153 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 OR52N4Q8NGI2 321 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 SNX22Q96L94 193 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 METTL8Q9H825 291 aaKnown RBP14.78□□□□□ -0.04
HDAC6-225ENST00000483506 TMEM138Q9NPI0 162 aa14.78□□□□□ -0.04
HDAC6-225ENST00000483506 CLDN34H7C241 214 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 TRIM77I1YAP6 450 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 GABRPO00591 440 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 PRTN3P24158 256 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 MTNR1BP49286 362 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 BMXP51813 675 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 RBMS3Q6XE24 437 aaKnown RBP14.77□□□□□ -0.05
HDAC6-225ENST00000483506 C17orf107Q6ZR85 190 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 ASCC1Q8N9N2 400 aaKnown RBP14.77□□□□□ -0.05
HDAC6-225ENST00000483506 OR5D13Q8NGL4 314 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 FAM216AQ8WUB2 273 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 THRSPQ92748 146 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 LHX4Q969G2 390 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 C1orf147Q96MC9 270 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-225ENST00000483506 OR5M11Q96RB7 305 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 ZMAT3Q9HA38 289 aaKnown RBP14.77□□□□□ -0.05
HDAC6-225ENST00000483506 GLS2Q9UI32 602 aa14.77□□□□□ -0.05
HDAC6-225ENST00000483506 SOX21Q9Y651 276 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-225ENST00000483506 A0A1W2PPH5 198 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 TMEM225BP0DP42 221 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 LMO1P25800 156 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 BDKRB2P30411 391 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 UBA52P62987 128 aaKnown RBP14.76□□□□□ -0.05
HDAC6-225ENST00000483506 GUCA2AQ02747 115 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 GPR50Q13585 617 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 BLMHQ13867 455 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 SPHARQ15513 63 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 RBM48Q5RL73 367 aaKnown RBP14.76□□□□□ -0.05
HDAC6-225ENST00000483506 RUSC1-AS1Q66K80 236 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 NCR3LG1Q68D85 454 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 TMEM200BQ69YZ2 307 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 PRSS48Q7RTY5 328 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 FAM185AQ8N0U4 392 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 C11orf42Q8N5U0 333 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 DERL3Q96Q80 235 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 OR14A2Q96R54 314 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 SIRT7Q9NRC8 400 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 CKLFQ9UBR5 152 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 FOXJ3Q9UPW0 622 aa14.76□□□□□ -0.05
HDAC6-225ENST00000483506 TRAV8-7A0A075B6U6 113 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 PNMA8CA0A1B0GUJ8 204 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 DNAJC9-AS1A6NH13 148 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 RNASEK-C17orf49H0YIS7 233 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 SH2D1BO14796 132 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 RGS10O43665 173 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 PSPNO60542 156 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 DEFB112Q30KQ8 113 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms