RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 MOB1AQ9H8S9 216 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 PLEKHA1Q9HB21 404 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 PAPOLBQ9NRJ5 636 aaKnown RBP11.13□□□□□ -0.63
VARS-226ENST00000483275 RBFOX1Q9NWB1 397 aaKnown RBP11.13□□□□□ -0.63
VARS-226ENST00000483275 TMEM14AQ9Y6G1 99 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 SESN1Q9Y6P5 492 aa11.13□□□□□ -0.63
VARS-226ENST00000483275 TCRBV4S1A1TA0A5B7 111 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 PSPNO60542 156 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 HAND1O96004 215 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 RBP4P02753 201 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 PF4P02776 101 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 LPLP06858 475 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 CHRM2P08172 466 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 VSIG8P0DPA2 414 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 GRK1Q15835 563 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 VAX1Q5SQQ9 334 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 UTF1Q5T230 341 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 TRAPPC6BQ86SZ2 158 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 ZDHHC13Q8IUH4 622 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 TCEANCQ8N8B7 351 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 OR4P4Q8NGL7 312 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 IL4I1Q96RQ9 567 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 TMEM133Q9H2Q1 129 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 RYR3Q15413 4870 aa11.12□□□□□ -0.63
VARS-226ENST00000483275 ZNF670-ZNF695F2Z2N8 137 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 G3V2T6 193 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 SIRPB1O00241 398 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 BCL3P20749 454 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 GDNFP39905 211 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 NPBWR2P48146 333 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 POU3F4P49335 361 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 DAPP51397 102 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 DYNLT3P51808 116 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 PTGES3Q15185 160 aaKnown RBP11.11□□□□□ -0.63
VARS-226ENST00000483275 ABCA11PQ4W5N1 156 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 MINOS1Q5TGZ0 78 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 MEPCEQ7L2J0 689 aaKnown RBP11.11□□□□□ -0.63
VARS-226ENST00000483275 EGFL6Q8IUX8 553 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 YIPF7Q8N8F6 280 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 DTX3Q8N9I9 347 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 UTP4Q969X6 686 aaKnown RBP11.11□□□□□ -0.63
VARS-226ENST00000483275 PRRG3Q9BZD7 231 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 ING3Q9NXR8 418 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 ENOPH1Q9UHY7 261 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.11□□□□□ -0.63
VARS-226ENST00000483275 SLC7A11Q9UPY5 501 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 SNX5Q9Y5X3 404 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 LINC00312Q9Y6C7 94 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 MINOS1-NBL1R4GNA1 71 aa11.11□□□□□ -0.63
VARS-226ENST00000483275 hADV38S2A0JD32 116 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 FAM90A22PA8MWA6 464 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 ALDOBP05062 364 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 CCL1P22362 96 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 OR3A1P47881 315 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 SLC35A2P78381 396 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 MEF2CQ06413 473 aaPredicted RBP11.1□□□□□ -0.63
VARS-226ENST00000483275 DEFB121Q5J5C9 76 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 AADACL4Q5VUY2 407 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 ZFP1Q6P2D0 407 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 FAHD1Q6P587 224 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 CENPVQ7Z7K6 275 aaPredicted RBP11.1□□□□□ -0.63
VARS-226ENST00000483275 AMIGO2Q86SJ2 522 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 CATSPERDQ86XM0 798 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 RDH10Q8IZV5 341 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 WFDC9Q8NEX5 89 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 RFT1Q96AA3 541 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 SNX22Q96L94 193 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 SLC25A33Q9BSK2 321 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 INPP5EQ9NRR6 644 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 KRT84Q9NSB2 600 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 CLN6Q9NWW5 311 aa11.1□□□□□ -0.63
VARS-226ENST00000483275 LOC107986453A0A1B0GWG9 222 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 A0A1W2PQL4 384 aaPredicted RBP11.09□□□□□ -0.63
VARS-226ENST00000483275 SYT7O43581 403 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 AMY1AP04745 511 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 AMY2AP04746 511 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 KRT8P05787 483 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 CCDC159P0C7I6 412 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 PRKACAP17612 351 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 HTR1DP28221 377 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 ACTR3P61158 418 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 ZNF91Q05481 1191 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 KPNB1Q14974 876 aaKnown RBP11.09□□□□□ -0.63
VARS-226ENST00000483275 C9orf152Q5JTZ5 239 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 Q6ZSR3 168 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 RNF144BQ7Z419 303 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 PYDC1Q8WXC3 89 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 CENPNQ96H22 339 aaPredicted RBP11.09□□□□□ -0.63
VARS-226ENST00000483275 CHST5Q9GZS9 411 aa11.09□□□□□ -0.63
VARS-226ENST00000483275 TSSC4Q9Y5U2 329 aaPredicted RBP11.09□□□□□ -0.63
VARS-226ENST00000483275 DHRS7CA6NNS2 312 aa11.08□□□□□ -0.64
VARS-226ENST00000483275 ENTPD6O75354 484 aa11.08□□□□□ -0.64
VARS-226ENST00000483275 CDK2P24941 298 aa11.08□□□□□ -0.64
VARS-226ENST00000483275 AZGP1P25311 298 aaKnown RBP11.08□□□□□ -0.64
VARS-226ENST00000483275 PEX2P28328 305 aa11.08□□□□□ -0.64
VARS-226ENST00000483275 KIR3DL2P43630 455 aa11.08□□□□□ -0.64
VARS-226ENST00000483275 P2RX3P56373 397 aa11.08□□□□□ -0.64
VARS-226ENST00000483275 RBM39Q14498 530 aaKnown RBP11.08□□□□□ -0.64
VARS-226ENST00000483275 ETV3LQ6ZN32 361 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms