RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TMEM82A0PJX8 343 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 F8VVB4 439 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 F8VWA3 439 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 J3KRW8 73 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 DHRS3O75911 302 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 DNAJC8O75937 253 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-206ENST00000483030 IGLV3-1P01715 115 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 AMY1AP04745 511 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 AMY2AP04746 511 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 ATP6V1B2P21281 511 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 MPZP25189 248 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 HTR1DP28221 377 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 MAGEA2P43356 314 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 ETV1P50549 477 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 ERVK11-1P61568 191 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 RPS7P62081 194 aaKnown RBP5.88□□□□□ -1.47
CSDE1-206ENST00000483030 PRR20EP86478 221 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 PRR20CP86479 221 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 PRR20DP86480 221 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 PRR20BP86481 221 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 PRR20AP86496 221 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 MEF2CQ06413 473 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-206ENST00000483030 IL18R1Q13478 541 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 C9orf152Q5JTZ5 239 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 CLVS2Q5SYC1 327 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 TMEM42Q69YG0 159 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 KCTD18Q6PI47 426 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-206ENST00000483030 DEGS2Q6QHC5 323 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 CD300LDQ6UXZ3 194 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 TCF23Q7RTU1 214 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 C16orf82Q7Z2V1 217 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 ZNF329Q86UD4 541 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 SPARTQ8N0X7 666 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 TPRX1Q8N7U7 411 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 BBS1Q8NFJ9 593 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 OR10G2Q8NGC3 310 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 ZNF649Q9BS31 505 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 SLC25A33Q9BSK2 321 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 MROQ9BYG7 248 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 GPR61Q9BZJ8 451 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 TMEM133Q9H2Q1 129 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 DPM3Q9P2X0 92 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 U3KQK5 164 aa5.88□□□□□ -1.47
CSDE1-206ENST00000483030 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 FAM230AA0A1W2PPH8 454 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 PRR32B1ATL7 298 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 DLGAP1O14490 977 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 PRODHO43272 600 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 MMP23AO75900 390 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 TTRP02766 147 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 HMGN1P05114 100 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 MRPL3P09001 348 aaKnown RBP5.87□□□□□ -1.47
CSDE1-206ENST00000483030 NHLRC4P0CG21 123 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-206ENST00000483030 SLC2A5P22732 501 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 LMO1P25800 156 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 BRS3P32247 399 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 THBS3P49746 956 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 ROM1Q03395 351 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 MFGE8Q08431 387 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-206ENST00000483030 IL24Q13007 206 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 DCTN2Q13561 401 aaKnown RBP5.87□□□□□ -1.47
CSDE1-206ENST00000483030 APOFQ13790 326 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 GRK1Q15835 563 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 SLC35D3Q5M8T2 416 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 LCN1P1Q5VSP4 162 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 UNQ9370/PRO34162Q6UXP9 181 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 BAIAP2L2Q6UXY1 529 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 ETV3LQ6ZN32 361 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 ZBTB49Q6ZSB9 765 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 C18orf65Q6ZTR6 163 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 ZNF679Q8IYX0 411 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 DEFB107AQ8IZN7 70 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 LINC00528Q8N1L1 170 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 ABHD12Q8N2K0 398 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 OR4P4Q8NGL7 312 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 TRMT10AQ8TBZ6 339 aaKnown RBP5.87□□□□□ -1.47
CSDE1-206ENST00000483030 GIPC3Q8TF64 312 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 TFAP2CQ92754 450 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 SNX22Q96L94 193 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 TTTY10Q9BZA0 68 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 PKIBQ9C010 78 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 YIPF3Q9GZM5 350 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 MAGIXQ9H6Y5 334 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 MTCH1Q9NZJ7 389 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 ACTR3BQ9P1U1 418 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 DNAJB9Q9UBS3 223 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 NUFIP1Q9UHK0 495 aaKnown RBP5.87□□□□□ -1.47
CSDE1-206ENST00000483030 IKZF2Q9UKS7 526 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.87□□□□□ -1.47
CSDE1-206ENST00000483030 LINC00312Q9Y6C7 94 aa5.87□□□□□ -1.47
CSDE1-206ENST00000483030 A0A1B0GTI1 187 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 TCRBV5S2A0A599 114 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 PSMB11A5LHX3 300 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 LEUTXA8MZ59 168 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 LOC110117498-PIK3R3F6TDL0 507 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 MAGEB4O15481 346 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-206ENST00000483030 SULT1B1O43704 296 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 OR2F2O95006 317 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 IGHA1P01876 353 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 GABRR1P24046 479 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms