RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PXT1Q8NFP0 134 aa17.29■□□□□ 0.36
SEC13-217ENST00000482647 TNFAIP8L1Q8WVP5 186 aa17.29■□□□□ 0.36
SEC13-217ENST00000482647 MGLLQ99685 303 aa17.29■□□□□ 0.36
SEC13-217ENST00000482647 FAM234AQ9H0X4 552 aa17.29■□□□□ 0.36
SEC13-217ENST00000482647 NOX4Q9NPH5 578 aa17.29■□□□□ 0.36
SEC13-217ENST00000482647 TRAV8-7A0A075B6U6 113 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 SFTPBP07988 381 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 CALCBP10092 127 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 CPEP16870 476 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 PTGFRP43088 359 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 BMXP51813 675 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 COL10A1Q03692 680 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 ZNF146Q15072 292 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 METTL11BQ5VVY1 283 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 UNQ9370/PRO34162Q6UXP9 181 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 ZNF367Q7RTV3 350 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 SVOPQ8N4V2 548 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 C8orf46Q8TAG6 207 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 UPRTQ96BW1 309 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 FAM192AQ9GZU8 254 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 ELL3Q9HB65 397 aaPredicted RBP17.28■□□□□ 0.36
SEC13-217ENST00000482647 ACOT13Q9NPJ3 140 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 LRRC42Q9Y546 428 aa17.28■□□□□ 0.36
SEC13-217ENST00000482647 TRBV23-1A0A0A0MS06 115 aa17.27■□□□□ 0.36
SEC13-217ENST00000482647 K7N7A8 449 aa17.27■□□□□ 0.36
SEC13-217ENST00000482647 PIN1P1O15428 100 aa17.27■□□□□ 0.36
SEC13-217ENST00000482647 HAND1O96004 215 aa17.27■□□□□ 0.36
SEC13-217ENST00000482647 FSHBP01225 129 aa17.27■□□□□ 0.36
SEC13-217ENST00000482647 TK1P04183 234 aa17.27■□□□□ 0.36
SEC13-217ENST00000482647 EMX1Q04741 257 aaPredicted RBP17.27■□□□□ 0.36
SEC13-217ENST00000482647 TRAM1Q15629 374 aa17.27■□□□□ 0.36
SEC13-217ENST00000482647 CEACAM19Q7Z692 300 aa17.27■□□□□ 0.36
SEC13-217ENST00000482647 CMTM4Q8IZR5 234 aa17.27■□□□□ 0.36
SEC13-217ENST00000482647 ASCC1Q8N9N2 400 aaKnown RBP17.27■□□□□ 0.36
SEC13-217ENST00000482647 TMEM203Q969S6 136 aa17.27■□□□□ 0.36
SEC13-217ENST00000482647 DOCK11Q5JSL3 2073 aa17.27■□□□□ 0.35
SEC13-217ENST00000482647 A0A1W2PQ09 198 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 SH2D1BO14796 132 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 TOX4O94842 621 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 EPHA1P21709 976 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 PSMA1P25786 263 aaKnown RBP17.26■□□□□ 0.35
SEC13-217ENST00000482647 DUSP1P28562 367 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 MTNR1BP49286 362 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 SNU13P55769 128 aaKnown RBP17.26■□□□□ 0.35
SEC13-217ENST00000482647 ARF6P62330 175 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 INSL4Q14641 139 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 RSU1Q15404 277 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 ELP2Q6IA86 826 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 ASCL4Q6XD76 172 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 CDH26Q8IXH8 852 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 WDFY2Q96P53 400 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 S100A13Q99584 98 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 PCGF1Q9BSM1 259 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 ONECUT1Q9UBC0 465 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 IL36RNQ9UBH0 155 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 NUP50Q9UKX7 468 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 ING4Q9UNL4 249 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 GSTK1Q9Y2Q3 226 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 KPTNQ9Y664 436 aa17.26■□□□□ 0.35
SEC13-217ENST00000482647 MEGF11A6BM72 1044 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 ZNF737O75373 536 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 MAS1P04201 325 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 FPR2P25090 351 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 OR3A4PP47883 348 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 KLF17Q5JT82 389 aaPredicted RBP17.25■□□□□ 0.35
SEC13-217ENST00000482647 PHC2Q8IXK0 858 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 SPARTQ8N0X7 666 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 JAGN1Q8N5M9 183 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 KIR3DL3Q8N743 410 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 OR5D13Q8NGL4 314 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 TBC1D15Q8TC07 691 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 SNX22Q96L94 193 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 METTL9Q9H1A3 318 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 TCF7L1Q9HCS4 588 aa17.25■□□□□ 0.35
SEC13-217ENST00000482647 EXOSC4Q9NPD3 245 aaKnown RBP17.25■□□□□ 0.35
SEC13-217ENST00000482647 MAGEA13PA6NCF6 341 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 MMP9P14780 707 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 GABRR1P24046 479 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 RPL31P62899 125 aaKnown RBP17.24■□□□□ 0.35
SEC13-217ENST00000482647 KRTAP21-3Q3LHN1 58 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 HSD17B12Q53GQ0 312 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 C1orf122Q6ZSJ8 110 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 NKAIN3Q8N8D7 197 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 PPP1R35Q8TAP8 253 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 PHYHIPQ92561 330 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 NKX3-1Q99801 234 aaPredicted RBP17.24■□□□□ 0.35
SEC13-217ENST00000482647 SIRPDQ9H106 197 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 OCEL1Q9H607 264 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 PCDHB16Q9NRJ7 776 aa17.24■□□□□ 0.35
SEC13-217ENST00000482647 CUBNO60494 3623 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 A0A1W2PPH5 198 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 TMEM82A0PJX8 343 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 ZNF780AO75290 641 aaPredicted RBP17.23■□□□□ 0.35
SEC13-217ENST00000482647 SC5DO75845 299 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 CDRT1O95170 752 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 RPS25P62851 125 aaKnown RBP17.23■□□□□ 0.35
SEC13-217ENST00000482647 BLMHQ13867 455 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 PDCD1Q15116 288 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 ZNF773Q6PK81 442 aa17.23■□□□□ 0.35
SEC13-217ENST00000482647 GDPD3Q7L5L3 318 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms