RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TMEM244Q5VVB8 128 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 ZNF626Q68DY1 528 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 TMEM219Q86XT9 240 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 OR4S1Q8NGB4 309 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 OR2T6Q8NHC8 308 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 PP6455Q8WZ26 134 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 ZNF714Q96N38 554 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 NPFFR1Q9GZQ6 430 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 RAB18Q9NP72 206 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 DAPL1A0PJW8 107 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 VGLL3A8MV65 326 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 H3BNX3 289 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 ZNF20P17024 532 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 PRKACAP17612 351 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 FAM58AQ8N1B3 248 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 LYG1Q8N1E2 194 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 DNAAF1Q8NEP3 725 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 OR11H6Q8NGC7 330 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 OR51A4Q8NGJ6 313 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 TRUB1Q8WWH5 349 aaKnown RBP14.98□□□□□ -0.01
CLK1-211ENST00000481641 C10orf35Q96D05 121 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 HRASLS5Q96KN8 279 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 SPACA5Q96QH8 159 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 RANBP3Q9H6Z4 567 aaPredicted RBP14.98□□□□□ -0.01
CLK1-211ENST00000481641 ZNF702PQ9H963 129 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 TCF19Q9Y242 345 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 TBL2Q9Y4P3 447 aaKnown RBP14.98□□□□□ -0.01
CLK1-211ENST00000481641 KIAA2026Q5HYC2 2103 aa14.98□□□□□ -0.01
CLK1-211ENST00000481641 IGKV1-12A0A0C4DH73 117 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 TRBV2A0A0J9YWF9 115 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 hADV38S2A0JD32 116 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 A6NDX4 124 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 J3QLW9 94 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 SIRPB1O00241 398 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 SLC16A6O15403 523 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 MMP23AO75900 390 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 IGKV1D-12P01611 117 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 RBP4P02753 201 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 HTR1AP08908 422 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 ZNF19P17023 458 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 PEX2P28328 305 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 SNRPGP62308 76 aaKnown RBP14.97□□□□□ -0.01
CLK1-211ENST00000481641 ACTA2P62736 377 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 ACTG2P63267 376 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 ACTC1P68032 377 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 ACTA1P68133 377 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 MEF2CQ06413 473 aaPredicted RBP14.97□□□□□ -0.01
CLK1-211ENST00000481641 KPNB1Q14974 876 aaKnown RBP14.97□□□□□ -0.01
CLK1-211ENST00000481641 BAIAP2L2Q6UXY1 529 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 LIAT1Q6ZQX7 453 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 UTS2BQ765I0 119 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 ZNF676Q8N7Q3 588 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 CFHR4Q92496 578 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 MALSU1Q96EH3 234 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 ABCB10Q9NRK6 738 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 HILPDAQ9Y5L2 63 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 ORC6Q9Y5N6 252 aa14.97□□□□□ -0.01
CLK1-211ENST00000481641 E9PQ18 207 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 CYB5AP00167 134 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 PRKACBP22694 351 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 OR3A1P47881 315 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 PDZK1IP1Q13113 114 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 SLC25A30Q5SVS4 291 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 FDX2Q6P4F2 183 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 Q8IYB0 196 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 ENTHD1Q8IYW4 607 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 OR5D18Q8NGL1 313 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 FOXRED1Q96CU9 486 aaPredicted RBP14.96□□□□□ -0.01
CLK1-211ENST00000481641 LGALS12Q96DT0 336 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 PELI1Q96FA3 418 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 C4orf36Q96KX1 117 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 MBOAT4Q96T53 435 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 GSTK1Q9Y2Q3 226 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 LINC00312Q9Y6C7 94 aa14.96□□□□□ -0.01
CLK1-211ENST00000481641 IGHV2-26A0A0B4J1V2 119 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 ISG15P05161 165 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 ALDH3A2P51648 485 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 ZNF146Q15072 292 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 C11orf88Q6PI97 169 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 Q6ZS46 218 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 LHFPL2Q6ZUX7 228 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 KCTD20Q7Z5Y7 419 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 LHFPL3Q86UP9 236 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 CBR4Q8N4T8 237 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 ACBD7Q8N6N7 88 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 OR13C3Q8NGS6 347 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 OR13C9Q8NGT0 318 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 RPS4Y2Q8TD47 263 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 OPALINQ96PE5 141 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 SEBOXQ9HB31 216 aaPredicted RBP14.95□□□□□ -0.02
CLK1-211ENST00000481641 HMG20AQ9NP66 347 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 SERTAD4Q9NUC0 356 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 HHLA2Q9UM44 414 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 EXOGQ9Y2C4 368 aaKnown RBP14.95□□□□□ -0.02
CLK1-211ENST00000481641 SESN1Q9Y6P5 492 aa14.95□□□□□ -0.02
CLK1-211ENST00000481641 OR4C45A6NMZ5 311 aa14.94□□□□□ -0.02
CLK1-211ENST00000481641 G3V4G9 280 aa14.94□□□□□ -0.02
CLK1-211ENST00000481641 MGST3O14880 152 aa14.94□□□□□ -0.02
CLK1-211ENST00000481641 OR2H2O95918 312 aa14.94□□□□□ -0.02
CLK1-211ENST00000481641 OCM2P0CE71 109 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms