RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CDK2AP1O14519 115 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 SPRY3O43610 288 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 PCMT1P22061 227 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 TMEM267Q0VDI3 215 aaPredicted RBP8.53□□□□□ -1.04
VEGFA-212ENST00000480614 KISS1Q15726 138 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 TEX29Q8N6K0 151 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 AKR7LQ8NHP1 331 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 C2CD4CQ8TF44 421 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 NAGKQ9UJ70 344 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 CD96P40200 585 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 TMEM116Q8NCL8 245 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 FCN1O00602 326 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 MBTPS2O43462 519 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 PMP22Q01453 160 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 OR4D9Q8NGE8 314 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 TECRQ9NZ01 308 aaKnown RBP8.53□□□□□ -1.04
VEGFA-212ENST00000480614 FAM221AA4D161 298 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 KLK10O43240 276 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 FCGR3BO75015 233 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 FGF9P31371 208 aaPredicted RBP8.52□□□□□ -1.04
VEGFA-212ENST00000480614 IZUMO4Q1ZYL8 232 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 TRMT61AQ96FX7 289 aaKnown RBP8.52□□□□□ -1.04
VEGFA-212ENST00000480614 PERPQ96FX8 193 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 SARGQ9BW04 601 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 HELZP42694 1942 aaKnown RBP8.52□□□□□ -1.04
VEGFA-212ENST00000480614 ZC3H12DA2A288 527 aaKnown RBP8.52□□□□□ -1.04
VEGFA-212ENST00000480614 HMSDA8MTL9 139 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 F2RL2O00254 374 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 PDCD6O75340 191 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 YBX1P67809 324 aaKnown RBP8.52□□□□□ -1.04
VEGFA-212ENST00000480614 GGNBP1Q5YKI7 109 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 PRSS42Q7Z5A4 293 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 ANXA10Q9UJ72 324 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 BOLA1Q9Y3E2 137 aa8.52□□□□□ -1.04
VEGFA-212ENST00000480614 B4DEV8 164 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 PI3P19957 117 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 ZNF788Q6ZQV5 615 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 LIAT1Q6ZQX7 453 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 H0Y8X5 98 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 CEACAM6P40199 344 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 PTGFRP43088 359 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 ASCL5Q7RTU5 278 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 LYG1Q8N1E2 194 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 MTFP1Q9UDX5 166 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 TMEM272A0A1B0GTI8 110 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 CD3EP07766 207 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 PSMB2P49721 201 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 ANAPC16Q96DE5 110 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 CACNG5Q9UF02 275 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 PRR14LQ5THK1 2151 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 POM121BA6NF01 834 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 TBX19O60806 448 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 HIST1H1DP16402 221 aaKnown RBP8.52□□□□□ -1.05
VEGFA-212ENST00000480614 KIR2DL1P43626 348 aaPredicted RBP8.52□□□□□ -1.05
VEGFA-212ENST00000480614 KIR2DL2P43627 348 aaPredicted RBP8.52□□□□□ -1.05
VEGFA-212ENST00000480614 SSPNQ14714 243 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 TRDCB7Z8K6 153 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 CYR61O00622 381 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 SOCS7O14512 581 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 ATG101Q9BSB4 218 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 ZNF107Q9UII5 783 aaPredicted RBP8.52□□□□□ -1.05
VEGFA-212ENST00000480614 CST7O76096 145 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 IGHA1P01876 353 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 IGHA2P01877 340 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 ASCL1P50553 236 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 SPATA46Q5T0L3 261 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 ABLIM2Q6H8Q1 611 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 WFDC5Q8TCV5 224 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 MPC1Q9Y5U8 109 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 ZNF646O15015 1829 aaPredicted RBP8.52□□□□□ -1.05
VEGFA-212ENST00000480614 TCRBV5S2A0A599 114 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 HLA-GP17693 338 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 ELOA3CA0A087WX78 387 aaPredicted RBP8.52□□□□□ -1.05
VEGFA-212ENST00000480614 PYCARD-AS1I3L0S3 204 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 IGLV3-25P01717 112 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 OR5C1Q8NGR4 320 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 FBXO17Q96EF6 278 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 OR5V1Q9UGF6 321 aa8.52□□□□□ -1.05
VEGFA-212ENST00000480614 STRCP1A6NGW2 1772 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 TNFAIP6P98066 277 aaPredicted RBP8.51□□□□□ -1.05
VEGFA-212ENST00000480614 TMEM88Q6PEY1 159 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 MS4A10Q96PG2 267 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 AUNIPQ9H7T9 357 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 TTC28Q96AY4 2481 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 C5orf52A6NGY3 159 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 CLDN34H7C241 214 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 CSF2RBP32927 897 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 TMEM204Q9BSN7 226 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 CXXC4Q9H2H0 198 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 NOTCH2Q04721 2471 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 PRRT4C9JH25 899 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 NEURL1O76050 574 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 NGFP01138 241 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 CST2P09228 141 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 CDC34P49427 236 aaPredicted RBP8.51□□□□□ -1.05
VEGFA-212ENST00000480614 ETV3LQ6ZN32 361 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 HSD17B13Q7Z5P4 300 aaPredicted RBP8.51□□□□□ -1.05
VEGFA-212ENST00000480614 LINC01465Q8N7H1 131 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 AMDHD2Q9Y303 409 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 HIST1H1BP16401 226 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms