RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 NUP50Q9UKX7 468 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 PIGLQ9Y2B2 252 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 AUP1Q9Y679 476 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 POMT1Q9Y6A1 747 aa4.05□□□□□ -1.76
PTCD3-213ENST00000480102 TRBV2A0A0J9YWF9 115 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 LOC107986453A0A1B0GWG9 222 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 hCG_1809904A0A1W2PP81 198 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 A0A1W2PPE2 198 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 A0A1W2PR64 198 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 A0A1W2PRV1 198 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 ISPDA4D126 451 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 OR2AT4A6NND4 320 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF850A8MQ14 1090 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 PRSS47A8MTI9 375 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF732B4DXR9 585 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 DVL1O14640 695 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 TCF21O43680 179 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF780AO75290 641 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 ZFPL1O95159 310 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 CYB5R3P00387 301 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 AMY1AP04745 511 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 CD2P06729 351 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 CHRM2P08172 466 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 HTR1AP08908 422 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 MRPL3P09001 348 aaKnown RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 LIMS3P0CW19 117 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 LIMS4P0CW20 117 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 MYL12AP19105 171 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 PSMA1P25786 263 aaKnown RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 PEX2P28328 305 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 ERP29P30040 261 aaKnown RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 CD80P33681 288 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 KCNJ3P48549 501 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 GBX2P52951 348 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 OR12D2P58182 307 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 NANOS3P60323 173 aaKnown RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 ELF3P78545 371 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 MFGE8Q08431 387 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 CDK5R1Q15078 307 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 UBE2V2Q15819 145 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 LRRC10Q5BKY1 277 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 AVPI1Q5T686 147 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 PRAMEF6Q5VXH4 476 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 NCR3LG1Q68D85 454 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 DMKNQ6E0U4 476 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 FAHD2BQ6P2I3 314 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 FIP1L1Q6UN15 594 aaKnown RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 SSX6Q7RTT6 188 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 BCDIN3DQ7Z5W3 292 aaKnown RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 LINC00596Q86U02 117 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 MKXQ8IYA7 352 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 OR10H4Q8NGA5 316 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 OR52I1Q8NGK6 324 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 OR5D13Q8NGL4 314 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 GPR148Q8TDV2 347 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 LRRC29Q8WV35 223 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 TRIM63Q969Q1 353 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 TMIGD2Q96BF3 282 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 SMIM19Q96E16 107 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 MRPS24Q96EL2 167 aaKnown RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 FAHD2AQ96GK7 314 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 TMEM80Q96HE8 168 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 RNF170Q96K19 258 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 FAM71F1Q96KD3 344 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 C4orf36Q96KX1 117 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 DCTN5Q9BTE1 182 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 ALG8Q9BVK2 526 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 FGF23Q9GZV9 251 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 COMMD4Q9H0A8 199 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 DUSP21Q9H596 190 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 LINC00574Q9H8X3 128 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 PLEKHA1Q9HB21 404 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 ISYNA1Q9NPH2 558 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 PCDHB16Q9NRJ7 776 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 PAK1IP1Q9NWT1 392 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 C1orf123Q9NWV4 160 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 CHCHD3Q9NX63 227 aaKnown RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 IL36GQ9NZH8 169 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 NLKQ9UBE8 527 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 GHRLQ9UBU3 117 aa4.04□□□□□ -1.76
PTCD3-213ENST00000480102 RPUSD1Q9UJJ7 312 aaKnown RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 FBN1P35555 2871 aaKnown RBP4.04□□□□□ -1.76
PTCD3-213ENST00000480102 IGKV1D-17A0A075B6S4 117 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 TRBV5-5A0A0J9YX44 114 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 A0A1B0GUS0 222 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 FAM90A10PA6NDY2 464 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 FAM90A18PA6NE21 464 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 FAM90A16PA6NEW6 464 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 FAM90A20PA6NIJ5 464 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 NKX6-3A6NJ46 265 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 FAM90A8PA6NJQ4 464 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 FAM90A7PA6NKC0 464 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 A6NLC8 198 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 FAM90A22PA8MWA6 464 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 FAM90A12PA8MX19 464 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 FAM90A5PA8MXJ8 464 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 FAM90A23PA8MXZ1 464 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 B5MCH6 92 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 K7N7A8 449 aa4.03□□□□□ -1.76
PTCD3-213ENST00000480102 M0R129 80 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms