RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 FAHD2AQ96GK7 314 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 NRIP2Q9BQI9 281 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 SULT4A1Q9BR01 284 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 FAAP24Q9BTP7 215 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 RIMS4Q9H426 269 aaPredicted RBP9.38□□□□□ -0.91
VTI1A-204ENST00000480057 C12orf4Q9NQ89 552 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 AK3Q9UIJ7 227 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 DCHS1Q96JQ0 3298 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 TRBV6-6A0A0A6YYG2 114 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 TRGV8A0A0C4DH27 118 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 UBE2QL1A1L167 161 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 ERVH48-1M5A8F1 160 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 MLNRO43193 412 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 OR7C1O76099 320 aaPredicted RBP9.37□□□□□ -0.91
VTI1A-204ENST00000480057 FCGR3AP08637 254 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 CHRNB4P30926 498 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 CD200P41217 278 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 TAS2R31P59538 309 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 SELENOVP59797 346 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 UBE2MP61081 183 aaKnown RBP9.37□□□□□ -0.91
VTI1A-204ENST00000480057 ZNF154Q13106 437 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 RBM39Q14498 530 aaKnown RBP9.37□□□□□ -0.91
VTI1A-204ENST00000480057 FCN2Q15485 313 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 ALKBH6Q3KRA9 238 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 CHRFAM7AQ494W8 412 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 SCGB2B2Q4G0G5 96 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 SPIN3Q5JUX0 258 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 FIP1L1Q6UN15 594 aaKnown RBP9.37□□□□□ -0.91
VTI1A-204ENST00000480057 OVCH2Q7RTZ1 564 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 LHFPL1Q86WI0 220 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 SPICQ8N5J4 248 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 POC1AQ8NBT0 407 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 SCCPDHQ8NBX0 429 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 TERB2Q8NHR7 220 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 ASB13Q8WXK3 278 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 DHRS9Q9BPW9 319 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 ST6GALNAC5Q9BVH7 336 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 SEBOXQ9HB31 216 aaPredicted RBP9.37□□□□□ -0.91
VTI1A-204ENST00000480057 HES4Q9HCC6 221 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 NGBQ9NPG2 151 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 TREM2Q9NZC2 230 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 ANXA10Q9UJ72 324 aa9.37□□□□□ -0.91
VTI1A-204ENST00000480057 PIEZO1Q92508 2521 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 CELSR3Q9NYQ7 3312 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 MEIKINA0A087WXM9 373 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 MCRIP1C9JLW8 97 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 H7C1Q1 480 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 SSNA1O43805 119 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 PMP2P02689 132 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 HPXP02790 462 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 RLN1P04808 185 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 VSIG10L2P0DP72 767 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 ANXA3P12429 323 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 PRKACAP17612 351 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 ANXA7P20073 488 aaKnown RBP9.36□□□□□ -0.91
VTI1A-204ENST00000480057 MDH2P40926 338 aaKnown RBP9.36□□□□□ -0.91
VTI1A-204ENST00000480057 FABP6P51161 128 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 KLF3P57682 345 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-204ENST00000480057 CBX3Q13185 183 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 ZNF146Q15072 292 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 NKPD1Q17RQ9 610 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 ZFP69Q49AA0 526 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 ATPAF1Q5TC12 328 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-204ENST00000480057 Q6ZR03 302 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 SLC25A42Q86VD7 318 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 OR10Z1Q8NGY1 313 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 ZNF431Q8TF32 576 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-204ENST00000480057 TMEM171Q8WVE6 324 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 DACT3Q96B18 629 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-204ENST00000480057 LRRC46Q96FV0 321 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 PPA2Q9H2U2 334 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 ZNF442Q9H7R0 627 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 ZNF286AQ9HBT8 521 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 RANGRFQ9HD47 186 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-204ENST00000480057 DECR2Q9NUI1 292 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 ZNF701Q9NV72 531 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-204ENST00000480057 SH3BGRL2Q9UJC5 107 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 OSGIN2Q9Y236 505 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 NPTNQ9Y639 398 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 CFAP47Q6ZTR5 3102 aa9.36□□□□□ -0.91
VTI1A-204ENST00000480057 ZGRF1Q86YA3 2104 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 ATP6V1G2-DDX39BF2Z307 99 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 F8VVB4 439 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 F8VWA3 439 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 H0YL77 283 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 RHBDL1O75783 438 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 NAPSAO96009 420 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 C1QBP02746 253 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 FPR2P25090 351 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 CFHR2P36980 270 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 ARPC4P59998 168 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 TSPAN5P62079 268 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 CD83Q01151 205 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 IKZF1Q13422 519 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 PEG10Q86TG7 708 aaKnown RBP9.35□□□□□ -0.91
VTI1A-204ENST00000480057 FAM90A1Q86YD7 464 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 TMEM185AQ8NFB2 350 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 OR11H7Q8NGC8 314 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 MRGPRFQ96AM1 343 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 NECAP2Q9NVZ3 263 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms