RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 NDNFQ8TB73 568 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 TRUB1Q8WWH5 349 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 AJUBAQ96IF1 538 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 GAL3ST2Q9H3Q3 398 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 MTCH1Q9NZJ7 389 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 SIGLEC9Q9Y336 463 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 SESN1Q9Y6P5 492 aa11.7□□□□□ -0.54
SMARCE1-209ENST00000478349 VWFP04275 2813 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 MGST3O14880 152 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 CHST1O43916 411 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 POU3F4P49335 361 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 DLX6P56179 175 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 MTCP1P56278 107 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 ACTA2P62736 377 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 ACTG2P63267 376 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 UBE2V2Q15819 145 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 SSX2Q16385 188 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 OR52W1Q6IF63 320 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 UTS2BQ765I0 119 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 SSX6Q7RTT6 188 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 LHFPL4Q7Z7J7 247 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 AMIGO2Q86SJ2 522 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 FAM58AQ8N1B3 248 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 Q8N2B8 174 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 OR4F17Q8NGA8 305 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 OR4F4Q96R69 305 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 RHOFQ9HBH0 211 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 OAZ3Q9UMX2 235 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 WNK1Q9H4A3 2382 aa11.69□□□□□ -0.54
SMARCE1-209ENST00000478349 TRGV10A0A0A0MS01 117 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 MEGF11A6BM72 1044 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 SH2D1BO14796 132 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 ZNF91Q05481 1191 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 SLC34A1Q06495 639 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 PLA1AQ53H76 456 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 MEDAGQ5VYS4 303 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 C16orf82Q7Z2V1 217 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 NDUFA11Q86Y39 141 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 C1QL4Q86Z23 238 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 C11orf44Q8N8P7 122 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 CREB3L1Q96BA8 519 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 CPNE2Q96FN4 548 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 CLEC7AQ9BXN2 247 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 TMEM133Q9H2Q1 129 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 EXOSC4Q9NPD3 245 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 FOXJ3Q9UPW0 622 aa11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 UBE2J1Q9Y385 318 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-209ENST00000478349 IGHV2-26A0A0B4J1V2 119 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 DAPL1A0PJW8 107 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 A6NDX4 124 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 H3BSH0 61 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 APOL3O95236 402 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 ISG15P05161 165 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 HTR1AP08908 422 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 PRKACAP17612 351 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 HTR1DP28221 377 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 ERP29P30040 261 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 BRS3P32247 399 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 CEACAM3P40198 252 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 P2RX3P56373 397 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 ZNF146Q15072 292 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 RTN4RL2Q86UN3 420 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 ZNF596Q8TC21 504 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 PIFOQ8TCI5 191 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 EME1Q96AY2 570 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 OPALINQ96PE5 141 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 ZNF702PQ9H963 129 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 HHLA2Q9UM44 414 aa11.67□□□□□ -0.54
SMARCE1-209ENST00000478349 IGKV1-27A0A075B6S5 117 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 TMEM82A0PJX8 343 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 SLC16A6O15403 523 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 INMTO95050 263 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 ATF1P18846 271 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 VDAC2P45880 294 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 CCR9P51686 369 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 ISL1P61371 349 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 TP53I3Q53FA7 332 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 C10orf67Q8IYJ2 551 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 PRSS35Q8N3Z0 413 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 CHST4Q8NCG5 386 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 OR2G2Q8NGZ5 317 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 CHST6Q9GZX3 395 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 RBFOX1Q9NWB1 397 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 HILPDAQ9Y5L2 63 aa11.66□□□□□ -0.54
SMARCE1-209ENST00000478349 SAC3D1A6NKF1 404 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 ENTPD6O75354 484 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 PAX6P26367 422 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 KIR3DL2P43630 455 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 MRPL28Q13084 256 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 PDZK1IP1Q13113 114 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 NSUN5P1Q3KNT7 163 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 SLC25A30Q5SVS4 291 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 FDX2Q6P4F2 183 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 TMEM219Q86XT9 240 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 SAXO1Q8IYX7 474 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 ACBD7Q8N6N7 88 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 OR13C3Q8NGS6 347 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 HAVCR2Q8TDQ0 301 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 R3HDM4Q96D70 268 aa11.65□□□□□ -0.54
SMARCE1-209ENST00000478349 MBOAT4Q96T53 435 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms