RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	ADIG	Q0VDE8	80 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	PNOC	Q13519	176 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	DMC1	Q14565	340 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334		Q6ZT83	130 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	CCNYL1	Q8N7R7	359 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	ACBD4	Q8NC06	268 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	TTL	Q8NG68	377 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	OR4M2	Q8NGB6	313 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	DYNC2LI1	Q8TCX1	351 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	DNAJB3	Q8WWF6	145 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	OR5P2	Q8WZ92	322 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	SMIM8	Q96KF7	97 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	GGTLC1	Q9BX51	225 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	SPZ1	Q9BXG8	430 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	ZNF717	Q9BY31	904 aa	Predicted RBP	2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	MRPL20	Q9BYC9	149 aa	Known RBP	2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	API5	Q9BZZ5	524 aa	Known RBP	2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	IMP3	Q9NV31	184 aa	Known RBP	2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	PRO0628	Q9UI54	55 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	FBXL3	Q9UKT7	428 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	SIGLEC7	Q9Y286	467 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	PPIL1	Q9Y3C6	166 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	POLR3A	O14802	1390 aa	Predicted RBP	2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	AHDC1	Q5TGY3	1603 aa	Predicted RBP	2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	KRBOX1	C9JBD0	128 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	GOLGA8K	D6RF30	607 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	GOLGA8M	H3BSY2	632 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	LGALS9	O00182	355 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	COCH	O43405	550 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	CYTH3	O43739	400 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	CCDC22	O60826	627 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	SHOX2	O60902	331 aa	Predicted RBP	2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	PSIP1	O75475	530 aa	Known RBP	2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	GATB	O75879	557 aa	Known RBP	2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	AHSA1	O95433	338 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	PSMG1	O95456	288 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	IGLV3-25	P01717	112 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	MT-ND4	P03905	459 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	RLN2	P04090	185 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	LIMS3	P0CW19	117 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	LIMS4	P0CW20	117 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	TAC1	P20366	129 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	PAX6	P26367	422 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	MAGEA2	P43356	314 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	AQP5	P55064	265 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	GFER	P55789	205 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	RAB25	P57735	213 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	RAB8A	P61006	207 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	PPID	Q08752	370 aa	Known RBP	2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	BNIP2	Q12982	314 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	ITGB3BP	Q13352	177 aa	Predicted RBP	2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	PMVK	Q15126	192 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	ZBTB6	Q15916	424 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	C6orf99	Q4VX62	202 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	ATP6AP1L	Q52LC2	224 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	RNASE13	Q5GAN3	156 aa	Known RBP	2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	CDKL4	Q5MAI5	379 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	SDHAF4	Q5VUM1	108 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	TMEM236	Q5W0B7	351 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	CLEC18B	Q6UXF7	455 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	UNQ9165/PRO28630	Q6UXU0	137 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	TPGS1	Q6ZTW0	290 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	TMEM25	Q86YD3	366 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	SPIC	Q8N5J4	248 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	RNF10	Q8N5U6	811 aa	Known RBP	2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	OR4M1	Q8NGD0	313 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	OR2AE1	Q8NHA4	323 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	C17orf50	Q8WW18	174 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	GHSR	Q92847	366 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	MRAP2	Q96G30	205 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	C8orf76	Q96K31	380 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	FAM19A4	Q96LR4	140 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	QKI	Q96PU8	341 aa	Known RBP eCLIP	2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	OR4K3	Q96R72	315 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	RSG1	Q9BU20	258 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	RDH14	Q9HBH5	336 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	RBFOX1	Q9NWB1	397 aa	Known RBP	2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	CBY1	Q9Y3M2	126 aa		2.21	□□□□□ -2.06
RBM39-231	ENST00000477334	NUP153	P49790	1475 aa	Known RBP	2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	RAD50	Q92878	1312 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	CENPVL3	A0A0U1RRI6	287 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	KIR2DS1	A0A191URI9	304 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334		A0A1B0GX12	115 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	FTCDNL1	E5RQL4	147 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	KLRC4-KLRK1	H3BQV0	150 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334		I3L4J1	428 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	UPK2	O00526	184 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	CDIPT	O14735	213 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	ENTPD6	O75354	484 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	SERPINB7	O75635	380 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	SCO1	O75880	301 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	APOE	P02649	317 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	ORM1	P02763	201 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	CDK1	P06493	297 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	ATF1	P18846	271 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	RCVRN	P35243	200 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	CDC34	P49427	236 aa	Predicted RBP	2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	TTPA	P49638	278 aa		2.2	□□□□□ -2.06

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