RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 HHLA2Q9UM44 414 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 KIAA2026Q5HYC2 2103 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 hADV38S2A0JD32 116 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 NUDT19A8MXV4 375 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 DLGAP1O14490 977 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 DNAJC8O75937 253 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-219ENST00000476625 ATP6V1B1P15313 513 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 CDK2P24941 298 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 OR3A4PP47883 348 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 GLIPR1P48060 266 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 RIDAP52758 137 aaKnown RBP9.46□□□□□ -0.9
HDAC6-219ENST00000476625 CXCR4P61073 352 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 CBX1P83916 185 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 ROM1Q03395 351 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 ZNF91Q05481 1191 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 RBM39Q14498 530 aaKnown RBP9.46□□□□□ -0.9
HDAC6-219ENST00000476625 ZNF829Q3KNS6 432 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-219ENST00000476625 SLC35D3Q5M8T2 416 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 TPTE2P1Q5T6R2 138 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 KCTD18Q6PI47 426 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-219ENST00000476625 EGFL6Q8IUX8 553 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 ELMOD2Q8IZ81 293 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 DPF1Q92782 380 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 LEAP2Q969E1 77 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 TBX5Q99593 518 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 MAGIXQ9H6Y5 334 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 TVP23BQ9NYZ1 205 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 MRM2Q9UI43 246 aaKnown RBP9.46□□□□□ -0.9
HDAC6-219ENST00000476625 LSM4Q9Y4Z0 139 aaKnown RBP9.46□□□□□ -0.9
HDAC6-219ENST00000476625 LINC00312Q9Y6C7 94 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 R4GMQ9 66 aa9.46□□□□□ -0.9
HDAC6-219ENST00000476625 ACOD1A6NK06 481 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 PRKYO43930 277 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 SNX3O60493 162 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 APOL3O95236 402 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 CLIC3O95833 236 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 CST1P01037 141 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 IGLV1-47P01700 117 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 OSMP13725 252 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 POU3F4P49335 361 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 DGCR2P98153 550 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 MEF2CQ06413 473 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-219ENST00000476625 AESQ08117 197 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 SNAPC1Q16533 368 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 HSP90B2PQ58FF3 399 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 ZNF322Q6U7Q0 402 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-219ENST00000476625 C16orf89Q6UX73 402 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 C16orf82Q7Z2V1 217 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 DHFR2Q86XF0 187 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 CAPSLQ8WWF8 208 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 RFT1Q96AA3 541 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 RAX2Q96IS3 184 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 P2RX4Q99571 388 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 DPM3Q9P2X0 92 aa9.45□□□□□ -0.9
HDAC6-219ENST00000476625 ARRDC5A6NEK1 342 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 LY6LH3BQJ8 138 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 ENTPD6O75354 484 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 PRKACAP17612 351 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 PEX2P28328 305 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 P2RX3P56373 397 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 HNF4GQ14541 408 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 HLA-DRB5Q30154 266 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 FAM98BQ52LJ0 330 aaKnown RBP9.44□□□□□ -0.9
HDAC6-219ENST00000476625 DEGS2Q6QHC5 323 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 SLC35F2Q8IXU6 374 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 ADGRG5Q8IZF4 528 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 RDH10Q8IZV5 341 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 OR56B4Q8NH76 319 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 CCDC124Q96CT7 223 aaKnown RBP9.44□□□□□ -0.9
HDAC6-219ENST00000476625 CNN2Q99439 309 aaKnown RBP9.44□□□□□ -0.9
HDAC6-219ENST00000476625 PPIL3Q9H2H8 161 aaKnown RBP9.44□□□□□ -0.9
HDAC6-219ENST00000476625 ADGRL4Q9HBW9 690 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 DNAH7Q8WXX0 4024 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 BIRC6Q9NR09 4857 aa9.44□□□□□ -0.9
HDAC6-219ENST00000476625 TENM2Q9NT68 2774 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 IGKV1-9A0A0C4DH69 117 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 IGKV1-12A0A0C4DH73 117 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 BUB1B-PAK6H3BSN5 160 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 DYNC1I1O14576 645 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 ZNF254O75437 659 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 IGKV1D-12P01611 117 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 HMGN1P05114 100 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 LMO1P25800 156 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 BRS3P32247 399 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 ECI1P42126 302 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 GYS2P54840 703 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 BDH1Q02338 343 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 IL18R1Q13478 541 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 C17orf58Q2M2W7 97 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 Q6ZSR3 168 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 C5orf56Q8N8D9 126 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 OR51D1Q8NGF3 324 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 COQ2Q96H96 371 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 AKR1E2Q96JD6 320 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 SPACA5Q96QH8 159 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 SLC25A19Q9HC21 320 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 MED4Q9NPJ6 270 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 PAPOLBQ9NRJ5 636 aaKnown RBP9.43□□□□□ -0.9
HDAC6-219ENST00000476625 MOB4Q9Y3A3 225 aa9.43□□□□□ -0.9
HDAC6-219ENST00000476625 HSPE1-MOB4S4R3N1 261 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms