RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 TMEM50BP56557 158 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 MRPS21P82921 87 aaKnown RBP7.33□□□□□ -1.24
VAPB-205ENST00000476395 AADACL3Q5VUY0 350 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 KIAA0895LQ68EN5 471 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 P4HA3Q7Z4N8 544 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 HOGA1Q86XE5 327 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 OR5AS1Q8N127 324 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 ZDHHC22Q8N966 263 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 OR6X1Q8NH79 312 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 CITED1Q99966 193 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 TMEM208Q9BTX3 173 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 PNRC2Q9NPJ4 139 aaKnown RBP7.33□□□□□ -1.24
VAPB-205ENST00000476395 FRYQ5TBA9 3013 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 CHD3Q12873 2000 aaKnown RBP7.33□□□□□ -1.24
VAPB-205ENST00000476395 SMCO3A2RU48 225 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 ZNF814B7Z6K7 855 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 SLC33A1O00400 549 aaPredicted RBP7.33□□□□□ -1.24
VAPB-205ENST00000476395 VAMP5O95183 116 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 MMP9P14780 707 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 FUT3P21217 361 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 IL24Q13007 206 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 BIKQ13323 160 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 MFAP5Q13361 173 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 IAH1Q2TAA2 248 aaPredicted RBP7.33□□□□□ -1.24
VAPB-205ENST00000476395 TMEM128Q5BJH2 165 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 ZNF468Q5VIY5 522 aaPredicted RBP7.33□□□□□ -1.24
VAPB-205ENST00000476395 NCR3LG1Q68D85 454 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 AWAT2Q6E213 333 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 ZNF880Q6PDB4 577 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 PLXDC2Q6UX71 529 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 BTNL3Q6UXE8 466 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 SUMF2Q8NBJ7 301 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 NUDT10Q8NFP7 164 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 OR52M1Q8NGK5 317 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 MRPL13Q9BYD1 178 aaKnown RBP7.33□□□□□ -1.24
VAPB-205ENST00000476395 CHRNA10Q9GZZ6 450 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 CD207Q9UJ71 328 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 MMP17Q9ULZ9 603 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 MTCH2Q9Y6C9 303 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 A0A1W2PR77 199 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 CA11O75493 328 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 SFT2D2O95562 160 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 AMBPP02760 352 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 CD55P08174 381 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 BCKDHBP21953 392 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 LMO1P25800 156 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 CCR5P51681 352 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 UBE2KP61086 200 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 TEX38Q6PEX7 206 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 CYB561D1Q8N8Q1 229 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 OR1L3Q8NH93 324 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 LPAR5Q9H1C0 372 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 MED29Q9NX70 200 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 FBLN5Q9UBX5 448 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 CYP8B1Q9UNU6 501 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 LIPGQ9Y5X9 500 aa7.33□□□□□ -1.24
VAPB-205ENST00000476395 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 A0A1W2PPC4 97 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 SHISA8B8ZZ34 492 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 MKRN2OSH3BPM6 223 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 TNFSF12O43508 249 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 CD33P20138 364 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 CXCR1P25024 350 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 SLC6A8P48029 635 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 MMP16P51512 607 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 POLR2HP52434 150 aaKnown RBP7.32□□□□□ -1.24
VAPB-205ENST00000476395 Q7L0L9 218 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 HPSE2Q8WWQ2 592 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 S100A13Q99584 98 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 BANF2Q9H503 90 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 B3GALT1Q9Y5Z6 326 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 TMEM269A0A1B0GVZ9 245 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 A8MVM7 634 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 ETV2O00321 342 aaPredicted RBP7.32□□□□□ -1.24
VAPB-205ENST00000476395 SOCS1O15524 211 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 IFNA10P01566 189 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 DANCRP0C864 163 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 OR5H8P0DN80 308 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 GCH1P30793 250 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 MAS1LP35410 378 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 ZP4Q12836 540 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 SP6Q3SY56 376 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 TRIM61Q5EBN2 209 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 DMRTA1Q5VZB9 504 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 WDR25Q64LD2 544 aaPredicted RBP7.32□□□□□ -1.24
VAPB-205ENST00000476395 GPR137CQ8N3F9 429 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 FGGYQ96C11 551 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 ATP6V0BQ99437 205 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 SLCO5A1Q9H2Y9 848 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 CUTCQ9NTM9 273 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 FOXD3Q9UJU5 478 aaPredicted RBP7.32□□□□□ -1.24
VAPB-205ENST00000476395 GPR132Q9UNW8 380 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 LHFPL6Q9Y693 200 aa7.32□□□□□ -1.24
VAPB-205ENST00000476395 NCOA6Q14686 2063 aaPredicted RBP7.31□□□□□ -1.24
VAPB-205ENST00000476395 IGKV1-9A0A0C4DH69 117 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 HSD17B6O14756 317 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 DRD1P21728 446 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 PTGDSP41222 190 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 NOVA1P51513 510 aaKnown RBP7.31□□□□□ -1.24
VAPB-205ENST00000476395 SLC35A1P78382 337 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms