RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 ZNF146Q15072 292 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 KRTAP24-1Q3LI83 254 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 HSD17B12Q53GQ0 312 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 ELP2Q6IA86 826 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 ASCL4Q6XD76 172 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 CD177Q8N6Q3 437 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 TMEM185AQ8NFB2 350 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 TMEM203Q969S6 136 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 DACT3Q96B18 629 aaPredicted RBP12.54□□□□□ -0.4
SNX13-207ENST00000475800 FOXRED1Q96CU9 486 aaPredicted RBP12.54□□□□□ -0.4
SNX13-207ENST00000475800 ORAI1Q96D31 301 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 TMPRSS13Q9BYE2 586 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 FAM192AQ9GZU8 254 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 C7orf69Q9H7B7 122 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 VCX3AQ9NNX9 186 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 HMG20AQ9NP66 347 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 MMP26Q9NRE1 261 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 RBFOX1Q9NWB1 397 aaKnown RBP12.54□□□□□ -0.4
SNX13-207ENST00000475800 NDUFB11Q9NX14 153 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 IL36GQ9NZH8 169 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 SF3B6Q9Y3B4 125 aaKnown RBP12.54□□□□□ -0.4
SNX13-207ENST00000475800 MAB21L2Q9Y586 359 aa12.54□□□□□ -0.4
SNX13-207ENST00000475800 IGKV1-12A0A0C4DH73 117 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 C22orf46C9J442 243 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 F8VVB4 439 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 F8VWA3 439 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 CCRL2O00421 344 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 ZNF780AO75290 641 aaPredicted RBP12.53□□□□□ -0.4
SNX13-207ENST00000475800 IGKV1D-12P01611 117 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 MAS1P04201 325 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 PPIAL4GP0DN37 164 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 SRD5A1P18405 259 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 SRMP19623 302 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 GALP22466 123 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 PSMB9P28065 219 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 RANBP1P43487 201 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 CAPZA1P52907 286 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 FGF12P61328 243 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 RPS25P62851 125 aaKnown RBP12.53□□□□□ -0.4
SNX13-207ENST00000475800 PAX8Q06710 450 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 GPR176Q14439 515 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 RSU1Q15404 277 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 DGUOKQ16854 277 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 BTN2A1Q7KYR7 527 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 BATF2Q8N1L9 274 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 JAGN1Q8N5M9 183 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 ZNRF1Q8ND25 227 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 OR5D13Q8NGL4 314 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 METTL9Q9H1A3 318 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 ELL3Q9HB65 397 aaPredicted RBP12.53□□□□□ -0.4
SNX13-207ENST00000475800 RPUSD1Q9UJJ7 312 aaKnown RBP12.53□□□□□ -0.4
SNX13-207ENST00000475800 AUP1Q9Y679 476 aa12.53□□□□□ -0.4
SNX13-207ENST00000475800 SVEP1Q4LDE5 3571 aa12.52□□□□□ -0.4
SNX13-207ENST00000475800 A0A087WXM4 84 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 TRBV23-1A0A0A0MS06 115 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 A0A1B0GW55 424 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 SH2D1BO14796 132 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 HAND1O96004 215 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
SNX13-207ENST00000475800 SFTPBP07988 381 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 DUX4L2P0CJ85 424 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 DUX4L3P0CJ86 424 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 DUX4L4P0CJ87 422 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 DUX4L5P0CJ88 424 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 DUX4L6P0CJ89 424 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 DUX4L7P0CJ90 424 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 NDUFB7P17568 137 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 SRP14P37108 136 aaKnown RBP12.52□□□□□ -0.41
SNX13-207ENST00000475800 OR3A4PP47883 348 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 INSL4Q14641 139 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 SSX1Q16384 188 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 GLT8D1Q68CQ7 371 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 DUX4L9Q6RFH8 374 aaPredicted RBP12.52□□□□□ -0.41
SNX13-207ENST00000475800 TMEM91Q6ZNR0 172 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 RNF144BQ7Z419 303 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 Q8NFD4 153 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 C8orf46Q8TAG6 207 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 TBC1D15Q8TC07 691 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 SNX22Q96L94 193 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 DCTN5Q9BTE1 182 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 ZNF696Q9H7X3 374 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 DUX4Q9UBX2 424 aa12.52□□□□□ -0.41
SNX13-207ENST00000475800 MAGEA13PA6NCF6 341 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 K7N7A8 449 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 FCN3O75636 299 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 SELLP14151 372 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 FABP5Q01469 135 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 COL10A1Q03692 680 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 IL13RA2Q14627 380 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 FAM27D1Q5T7N8 215 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 SYT6Q5T7P8 510 aaPredicted RBP12.51□□□□□ -0.41
SNX13-207ENST00000475800 CD200R1LQ6Q8B3 271 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 C1QL2Q7Z5L3 287 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 ASCC1Q8N9N2 400 aaKnown RBP12.51□□□□□ -0.41
SNX13-207ENST00000475800 CHST4Q8NCG5 386 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 TSPAN14Q8NG11 270 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 OR51T1Q8NGJ9 327 aa12.51□□□□□ -0.41
SNX13-207ENST00000475800 NANPQ8TBE9 248 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms