RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ZNF581Q9P0T4 197 aa11.65□□□□□ -0.54
TRAF4-210ENST00000475329 NUBP2Q9Y5Y2 271 aa11.65□□□□□ -0.54
TRAF4-210ENST00000475329 PLCE1Q9P212 2302 aa11.65□□□□□ -0.54
TRAF4-210ENST00000475329 HIVEP3Q5T1R4 2406 aa11.65□□□□□ -0.55
TRAF4-210ENST00000475329 IGHV3-64DA0A0J9YX35 117 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 FUOMA2VDF0 154 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 SHISA9B4DS77 424 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 NOS1APO75052 506 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-210ENST00000475329 NXPH2O95156 264 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 CLDN14O95500 239 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 RAB3DO95716 219 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 PTBP3O95758 552 aaKnown RBP11.64□□□□□ -0.55
TRAF4-210ENST00000475329 CD74P04233 296 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 TCRBP04435 133 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 OR4A8P0C604 315 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 NAT1P18440 290 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 TNFSF4P23510 183 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 PMELP40967 661 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 ZNF81P51508 661 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 ERVK11-1P61568 191 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 MEF2DQ14814 521 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 DAZAP2Q15038 168 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-210ENST00000475329 ADIPOQQ15848 244 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 ACTBL2Q562R1 376 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 RNASE10Q5GAN6 216 aaKnown RBP11.64□□□□□ -0.55
TRAF4-210ENST00000475329 ATAD3CQ5T2N8 411 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 SFRP4Q6FHJ7 346 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-210ENST00000475329 FAAP20Q6NZ36 180 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 ZNF782Q6ZMW2 699 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-210ENST00000475329 DMRTC2Q8IXT2 367 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-210ENST00000475329 GVQW1Q8N7I0 195 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 ITLN2Q8WWU7 325 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-210ENST00000475329 UPRTQ96BW1 309 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 HS3ST6Q96QI5 342 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 SULT4A1Q9BR01 284 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 MARVELD1Q9BSK0 173 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 FAAP24Q9BTP7 215 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 SPACA1Q9HBV2 294 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 RCC2Q9P258 522 aaKnown RBP11.64□□□□□ -0.55
TRAF4-210ENST00000475329 IL36RNQ9UBH0 155 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 AK3Q9UIJ7 227 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 ZDHHC8Q9ULC8 765 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 PLEKHA6Q9Y2H5 1048 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 RNF115Q9Y4L5 304 aa11.64□□□□□ -0.55
TRAF4-210ENST00000475329 hCG_1807616A0A1W2PRN6 198 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 M0QYG6 137 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 SPRY3O43610 288 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 ZG16O60844 167 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 AMY2BP19961 511 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 HLA-DMAP28067 261 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 PDCD1Q15116 288 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 MPPED2Q15777 294 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 OR52W1Q6IF63 320 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 WDR82Q6UXN9 313 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 BTN2A1Q7KYR7 527 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 HOGA1Q86XE5 327 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 C11orf53Q8IXP5 236 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 OR4S1Q8NGB4 309 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 OR4D10Q8NGI6 311 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 FBXW5Q969U6 566 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 CYYR1Q96J86 154 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 MEGF10Q96KG7 1140 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 OR2V2Q96R30 315 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 CMSS1Q9BQ75 279 aaKnown RBP11.63□□□□□ -0.55
TRAF4-210ENST00000475329 CHST6Q9GZX3 395 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 FN3KRPQ9HA64 309 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 HES4Q9HCC6 221 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 UFSP2Q9NUQ7 469 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 NUDT15Q9NV35 164 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 ZNF701Q9NV72 531 aaPredicted RBP11.63□□□□□ -0.55
TRAF4-210ENST00000475329 C1orf123Q9NWV4 160 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 ZFYVE26Q68DK2 2539 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 TANC2Q9HCD6 1990 aa11.63□□□□□ -0.55
TRAF4-210ENST00000475329 NBASA2RRP1 2371 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 UBE2QL1A1L167 161 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 DISC1C4P0D8 188 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 INMT-MINDY4F8WBC2 141 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 PFDN1O60925 122 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 IGHV1-46P01743 117 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 AMY2AP04746 511 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 DTYMKP23919 212 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 TAS2R46P59540 309 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 BTG1P62324 171 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 SPIN3Q5JUX0 258 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 ZNF826PQ6ZT77 177 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 OR10Z1Q8NGY1 313 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 OR56B4Q8NH76 319 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 SNAPC3Q92966 411 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 DIRC2Q96SL1 478 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 TINAGL1Q9GZM7 467 aaPredicted RBP11.62□□□□□ -0.55
TRAF4-210ENST00000475329 C20orf85Q9H1P6 137 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 IFT22Q9H7X7 185 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 C12orf4Q9NQ89 552 aa11.62□□□□□ -0.55
TRAF4-210ENST00000475329 NPDC1Q9NQX5 325 aaPredicted RBP11.62□□□□□ -0.55
TRAF4-210ENST00000475329 TRAV6A0A075B6T7 132 aa11.61□□□□□ -0.55
TRAF4-210ENST00000475329 B8ZZF3 427 aa11.61□□□□□ -0.55
TRAF4-210ENST00000475329 MCRIP1C9JLW8 97 aa11.61□□□□□ -0.55
TRAF4-210ENST00000475329 E7EQL1 145 aa11.61□□□□□ -0.55
TRAF4-210ENST00000475329 NDUFB6O95139 128 aa11.61□□□□□ -0.55
TRAF4-210ENST00000475329 GLAP06280 429 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms