RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TEX26Q8N6G2 289 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 ACOT4Q8N9L9 421 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 Q8NA96 180 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 SUMF2Q8NBJ7 301 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 OR4K17Q8NGC6 315 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 OR4D11Q8NGI4 311 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 OR4X1Q8NH49 305 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 MRAPQ8TCY5 172 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 VN1R17PQ8TDU5 208 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF418Q8TF45 676 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 CLEC4CQ8WTT0 213 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM170AQ8WVE7 144 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 TWIST2Q8WVJ9 160 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 BTF3L4Q96K17 158 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 MS4A10Q96PG2 267 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 C20orf24Q9BUV8 137 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 SYNPO2LQ9H987 977 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 PATZ1Q9HBE1 687 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF107Q9UII5 783 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 HSPB8Q9UJY1 196 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 WDR45Q9Y484 360 aa5.22□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF646O15015 1829 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 LOC102724200A0A096LPH7 203 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 A0A0J9YY10 115 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 A0A1B0GX78 115 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 IGLC7A0M8Q6 106 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 CLDN34H7C241 214 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 P2RX6O15547 441 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 YPEL1O60688 119 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 LSM8O95777 96 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 DDAH2O95865 285 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 TYMSP04818 313 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 ICAM1P05362 532 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 CD99P14209 185 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 GNB3P16520 340 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 CR2P20023 1033 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 ACP1P24666 158 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 ATP6V0CP27449 155 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 BSGP35613 385 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 CHI3L1P36222 383 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 LPAR6P43657 344 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 HTR6P50406 440 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 VAMP7P51809 220 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 CAV3P56539 151 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 TAS2R50P59544 299 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 GNG3P63215 75 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 SLC25A11Q02978 314 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 SRSF1Q07955 248 aaKnown RBP eCLIP5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 PLCXD2Q0VAA5 305 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 LINC00303Q3SY05 128 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 LRRC73Q5JTD7 316 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 C9orf50Q5SZB4 431 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 FKBP1CQ5VVH2 108 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 ANKRD16Q6P6B7 361 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 Q7L0L9 218 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 ACOT1Q86TX2 421 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 KLHDC8AQ8IYD2 350 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 ZNF440Q8IYI8 595 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 SLC5A8Q8N695 610 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 TMEM251Q8N6I4 163 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 FADS6Q8N9I5 356 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 ACVR1CQ8NER5 493 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 OR10G2Q8NGC3 310 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 OR4N2Q8NGD1 307 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 OR52I1Q8NGK6 324 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 OR52I2Q8NH67 350 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 KCNG3Q8TAE7 436 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 OVCA2Q8WZ82 227 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 DAZLQ92904 295 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 TVP23CQ96ET8 276 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 YPEL2Q96QA6 119 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 GABRG3Q99928 467 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 MRIQ9BWK5 157 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 GTSF1LQ9H1H1 148 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 BANF2Q9H503 90 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 FGF20Q9NP95 211 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 PXMP2Q9NR77 195 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 TMEM106BQ9NUM4 274 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 ANKRD10Q9NXR5 420 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 DNAJC27Q9NZQ0 273 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 MARCH4Q9P2E8 410 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 VPREB3Q9UKI3 123 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 B3GALT5Q9Y2C3 310 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 RNF115Q9Y4L5 304 aa5.21□□□□□ -1.58
ECHDC1-215ENST00000475319 ZFC3H1O60293 1989 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 IGHV2-26A0A0B4J1V2 119 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 A0A0G2JMM0 328 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 SMIM35A0A1B0GVV1 85 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 A0A1W2PPB8 328 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 TMEM150BA6NC51 233 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 GAGE10A6NGK3 116 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 A8MT66 165 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 KIR3DP1A8MWS1 328 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 FTCDNL1E5RQL4 147 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 F5H5T6 163 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 ETV2O00321 342 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 RFXANKO14593 260 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 TNFRSF13BO14836 293 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 RAB29O14966 203 aa5.2□□□□□ -1.58
ECHDC1-215ENST00000475319 NKX2-8O15522 239 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms