RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 YIPF7Q8N8F6 280 aa19.94■□□□□ 0.78
TMEM54-205ENST00000475208 OR52N4Q8NGI2 321 aa19.94■□□□□ 0.78
TMEM54-205ENST00000475208 NRBF2Q96F24 287 aa19.94■□□□□ 0.78
TMEM54-205ENST00000475208 KMT2CQ8NEZ4 4911 aaKnown RBP19.93■□□□□ 0.78
TMEM54-205ENST00000475208 PF4P02776 101 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 KRT8P05787 483 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 HTR1DP28221 377 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 FUT6P51993 359 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 IL18R1Q13478 541 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 FLOT2Q14254 428 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 TCTEX1D4Q5JR98 221 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 ZBTB49Q6ZSB9 765 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 CCDC121Q6ZUS5 278 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 C16orf82Q7Z2V1 217 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 CENPVQ7Z7K6 275 aaPredicted RBP19.93■□□□□ 0.78
TMEM54-205ENST00000475208 OR4P4Q8NGL7 312 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 TMEM163Q8TC26 289 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 BORCS8Q96FH0 119 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 TBX5Q99593 518 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 CHST5Q9GZS9 411 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 FAM53CQ9NYF3 392 aa19.93■□□□□ 0.78
TMEM54-205ENST00000475208 TCRBV4S1A1TA0A5B7 111 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 K7EIL1 84 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 PSPNO60542 156 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 MMP23AO75900 390 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 CD24P25063 80 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 SLC35A2P78381 396 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 ZNF91Q05481 1191 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 VAX1Q5SQQ9 334 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 TRAPPC6BQ86SZ2 158 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 CATSPERDQ86XM0 798 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 AKR1E2Q96JD6 320 aa19.92■□□□□ 0.78
TMEM54-205ENST00000475208 SEBOXQ9HB31 216 aaPredicted RBP19.92■□□□□ 0.78
TMEM54-205ENST00000475208 TSSC4Q9Y5U2 329 aaPredicted RBP19.92■□□□□ 0.78
TMEM54-205ENST00000475208 TCRBV3S1A0A5B6 114 aa19.91■□□□□ 0.78
TMEM54-205ENST00000475208 DUSP1P28562 367 aa19.91■□□□□ 0.78
TMEM54-205ENST00000475208 EFNB1P98172 346 aa19.91■□□□□ 0.78
TMEM54-205ENST00000475208 GID4Q8IVV7 300 aa19.91■□□□□ 0.78
TMEM54-205ENST00000475208 Q8IYB0 196 aa19.91■□□□□ 0.78
TMEM54-205ENST00000475208 ENTHD1Q8IYW4 607 aa19.91■□□□□ 0.78
TMEM54-205ENST00000475208 CAPSLQ8WWF8 208 aa19.91■□□□□ 0.78
TMEM54-205ENST00000475208 IL4I1Q96RQ9 567 aa19.91■□□□□ 0.78
TMEM54-205ENST00000475208 LIN7BQ9HAP6 207 aa19.91■□□□□ 0.78
TMEM54-205ENST00000475208 RBFOX1Q9NWB1 397 aaKnown RBP19.91■□□□□ 0.78
TMEM54-205ENST00000475208 MGST3O14880 152 aa19.9■□□□□ 0.78
TMEM54-205ENST00000475208 MITFO75030 526 aaPredicted RBP19.9■□□□□ 0.78
TMEM54-205ENST00000475208 C12orf73Q69YU5 71 aa19.9■□□□□ 0.78
TMEM54-205ENST00000475208 BAIAP2L2Q6UXY1 529 aa19.9■□□□□ 0.78
TMEM54-205ENST00000475208 MYDGFQ969H8 173 aa19.9■□□□□ 0.78
TMEM54-205ENST00000475208 ADI1Q9BV57 179 aa19.9■□□□□ 0.78
TMEM54-205ENST00000475208 KRT84Q9NSB2 600 aa19.9■□□□□ 0.78
TMEM54-205ENST00000475208 DPM3Q9P2X0 92 aa19.9■□□□□ 0.78
TMEM54-205ENST00000475208 TRBV2A0A0J9YWF9 115 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 ZAR1LA6NP61 321 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 SERPINA3P01011 423 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 LPLP06858 475 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 EPHA2P29317 976 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 NPBWR2P48146 333 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 POU3F4P49335 361 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 SNU13P55769 128 aaKnown RBP19.89■□□□□ 0.77
TMEM54-205ENST00000475208 P2RX3P56373 397 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 PRAMEF5Q5TYX0 476 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 ABHD12Q8N2K0 398 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 CCDC54Q8NEL0 328 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 OR4X2Q8NGF9 303 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 RCC1LQ96I51 464 aaKnown RBP19.89■□□□□ 0.77
TMEM54-205ENST00000475208 SLC25A33Q9BSK2 321 aa19.89■□□□□ 0.77
TMEM54-205ENST00000475208 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.89■□□□□ 0.77
TMEM54-205ENST00000475208 UBE2J1Q9Y385 318 aaPredicted RBP19.89■□□□□ 0.77
TMEM54-205ENST00000475208 A0A1W2PQL4 384 aaPredicted RBP19.88■□□□□ 0.77
TMEM54-205ENST00000475208 METTL15A6NJ78 407 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 ENTPD6O75354 484 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 CALCBP10092 127 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 BCL3P20749 454 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 BRS3P32247 399 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 OR3A1P47881 315 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 ZNF146Q15072 292 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 ABCA11PQ4W5N1 156 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 KHDC1LQ5JSQ8 128 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 C11orf87Q6NUJ2 197 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 FAM58AQ8N1B3 248 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 STMN2Q93045 179 aa19.88■□□□□ 0.77
TMEM54-205ENST00000475208 LOC107986453A0A1B0GWG9 222 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 APOL3O95236 402 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 CYB5AP00167 134 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 PRKACAP17612 351 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 ERP29P30040 261 aaKnown RBP19.87■□□□□ 0.77
TMEM54-205ENST00000475208 RBP2P50120 134 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 ATP1B3P54709 279 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 BDH1Q02338 343 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 RTN4RL2Q86UN3 420 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 ZNF596Q8TC21 504 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 UTP4Q969X6 686 aaKnown RBP19.87■□□□□ 0.77
TMEM54-205ENST00000475208 C10orf35Q96D05 121 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 GAL3ST2Q9H3Q3 398 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.87■□□□□ 0.77
TMEM54-205ENST00000475208 WARS2Q9UGM6 360 aaKnown RBP19.87■□□□□ 0.77
TMEM54-205ENST00000475208 COL7A1Q02388 2944 aa19.87■□□□□ 0.77
TMEM54-205ENST00000475208 FAM172BPA6NC97 362 aa19.86■□□□□ 0.77
TMEM54-205ENST00000475208 SH2D7A6NKC9 451 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms