RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 TMEM233B4DJY2 109 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 FAM72CH0Y354 149 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 PDE6DO43924 150 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 IGLV3-25P01717 112 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 SOX18P35713 384 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 GLP1RP43220 463 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 MAGEA12P43365 314 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 LTC4SQ16873 150 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 NKAPLQ5M9Q1 402 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 FAM72AQ5TYM5 149 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 FAM72DQ6L9T8 149 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 TMPRSS11AQ6ZMR5 421 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 FAM72BQ86X60 149 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 UEVLDQ8IX04 471 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 C9orf40Q8IXQ3 194 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 TDHQ8IZJ6 230 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 OR52E4Q8NGH9 312 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 OR4X1Q8NH49 305 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF418Q8TF45 676 aaPredicted RBP4.22□□□□□ -1.73
NPHP3-206ENST00000474871 SECTM1Q8WVN6 248 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 RAB8BQ92930 207 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 ERMAPQ96PL5 475 aaPredicted RBP4.22□□□□□ -1.73
NPHP3-206ENST00000474871 KXD1Q9BQD3 176 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 TSSK6Q9BXA6 273 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 TMEFF2Q9UIK5 374 aaPredicted RBP4.22□□□□□ -1.73
NPHP3-206ENST00000474871 NPIPB5A8MRT5 1133 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 AIREO43918 545 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 ZIC3O60481 467 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 LILRA1O75019 489 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 TRAPPC6AO75865 159 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 RENP00797 406 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 TRGC1P0CF51 173 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 GKN3PP0CG01 181 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 NFYAP23511 347 aaPredicted RBP4.22□□□□□ -1.73
NPHP3-206ENST00000474871 FAUP35544 74 aaKnown RBP4.22□□□□□ -1.73
NPHP3-206ENST00000474871 RPS27AP62979 156 aaKnown RBP4.22□□□□□ -1.73
NPHP3-206ENST00000474871 SSX1Q16384 188 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 ARHGAP11BQ3KRB8 267 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 TMEM128Q5BJH2 165 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 Q6ZTK2 550 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 LAS2Q8IYD9 372 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 FAM24BQ8N5W8 94 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 DTWD2Q8NBA8 298 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 PELI1Q96FA3 418 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 OR2M2Q96R28 347 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 PITX2Q99697 317 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 MARCH5Q9NX47 278 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 VWA8A3KMH1 1905 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 TRAV14DV4A0A0A6YYC5 116 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 TMEM8BA6NDV4 472 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 IFITM5A6NNB3 132 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 SCGNO76038 276 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 MMP7P09237 267 aaPredicted RBP4.21□□□□□ -1.73
NPHP3-206ENST00000474871 LYL1P12980 280 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 RPL7P18124 248 aaKnown RBP4.21□□□□□ -1.73
NPHP3-206ENST00000474871 PMCHP20382 165 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 SIRPAP78324 504 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 DUSP2Q05923 314 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 KIAA0100Q14667 2235 aaKnown RBP4.21□□□□□ -1.73
NPHP3-206ENST00000474871 LTBP2Q14767 1821 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 ELAVL1Q15717 326 aaKnown RBP4.21□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF534Q76KX8 674 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 IGDCC3Q8IVU1 814 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 SLC35G3Q8N808 338 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 ADAD2Q8NCV1 583 aaKnown RBP4.21□□□□□ -1.73
NPHP3-206ENST00000474871 OR1B1Q8NGR6 318 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 KLK6Q92876 244 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 TAAR8Q969N4 342 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 BMFQ96LC9 184 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF681Q96N22 645 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 TBX15Q96SF7 602 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 SDF2Q99470 211 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 NELFAQ9H3P2 528 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 PLAC1Q9HBJ0 212 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 PLA2G2EQ9NZK7 142 aa4.21□□□□□ -1.73
NPHP3-206ENST00000474871 B5MCH6 92 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 PPP5D1E7EU14 171 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 MLNRO43193 412 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 PRICKLE3O43900 615 aaPredicted RBP4.21□□□□□ -1.74
NPHP3-206ENST00000474871 SMIM17P0DL12 118 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 PSG7Q13046 419 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 UBE2V2Q15819 145 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 ELOA3BQ3SY89 546 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 PDZD11Q5EBL8 140 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 C6orf226Q5I0X4 101 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 HACD2Q6Y1H2 254 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 ZNF730Q6ZMV8 503 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 IZUMO1Q8IYV9 350 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 ZNF738Q8NE65 137 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 ELOA3Q8NG57 546 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 C8orf46Q8TAG6 207 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 SYNPRQ8TBG9 265 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 Q8WTZ3 238 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 OR51J1Q9H342 316 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 KCNK15Q9H427 330 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 ZMAT4Q9H898 229 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 NOX3Q9HBY0 568 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 HRASLS2Q9NWW9 162 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 CCDC167Q9P0B6 97 aa4.21□□□□□ -1.74
NPHP3-206ENST00000474871 PIGBOS1A0A0B4J2F0 54 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms