RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 NHLRC3Q5JS37 347 aa14.02□□□□□ -0.17
SCAF11-206ENST00000474828 FAM27D1Q5T7N8 215 aa14.02□□□□□ -0.17
SCAF11-206ENST00000474828 DDI2Q5TDH0 399 aa14.02□□□□□ -0.17
SCAF11-206ENST00000474828 DCAF12L2Q5VW00 463 aa14.02□□□□□ -0.17
SCAF11-206ENST00000474828 NKAIN3Q8N8D7 197 aa14.02□□□□□ -0.17
SCAF11-206ENST00000474828 RFT1Q96AA3 541 aa14.02□□□□□ -0.17
SCAF11-206ENST00000474828 C1orf147Q96MC9 270 aaPredicted RBP14.02□□□□□ -0.17
SCAF11-206ENST00000474828 UQCC2Q9BRT2 126 aa14.02□□□□□ -0.17
SCAF11-206ENST00000474828 RPUSD1Q9UJJ7 312 aaKnown RBP14.02□□□□□ -0.17
SCAF11-206ENST00000474828 A0A1W2PPK0 400 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 K7N7A8 449 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 NDUFB3O43676 98 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 PLATP00750 562 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 CHRM2P08172 466 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 SELLP14151 372 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 SRMP19623 302 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 MTNR1BP49286 362 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 GMFBP60983 142 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 FGF12P61328 243 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 FABP5Q01469 135 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 LRRC10Q5BKY1 277 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 CEACAM19Q7Z692 300 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 TEX29Q8N6K0 151 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 ZNRF1Q8ND25 227 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 OR5D18Q8NGL1 313 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 DCTN5Q9BTE1 182 aa14.01□□□□□ -0.17
SCAF11-206ENST00000474828 TRDV1A0A1B0GX56 115 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 CCRL2O00421 344 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 ENSAO43768 121 aaKnown RBP14□□□□□ -0.17
SCAF11-206ENST00000474828 RGS9O75916 674 aaPredicted RBP14□□□□□ -0.17
SCAF11-206ENST00000474828 INMTO95050 263 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 TFF1P04155 84 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 TMEM225BP0DP42 221 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 HSD17B12Q53GQ0 312 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 C1orf100Q5SVJ3 147 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 BTN2A1Q7KYR7 527 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 FGFRL1Q8N441 504 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 TNFAIP8L1Q8WVP5 186 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 EMG1Q92979 244 aaKnown RBP14□□□□□ -0.17
SCAF11-206ENST00000474828 TMEM203Q969S6 136 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 SHARPINQ9H0F6 387 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 IFT22Q9H7X7 185 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 IL36RNQ9UBH0 155 aa14□□□□□ -0.17
SCAF11-206ENST00000474828 SLC25A10Q9UBX3 287 aaPredicted RBP14□□□□□ -0.17
SCAF11-206ENST00000474828 ARHGAP32A7KAX9 2087 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 TRBV23-1A0A0A0MS06 115 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 ARL6IP5O75915 188 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 TK1P04183 234 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 MMP9P14780 707 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 CFPP27918 469 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 FGF9P31371 208 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-206ENST00000474828 OR3A4PP47883 348 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 FAHD2BQ6P2I3 314 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-206ENST00000474828 Q6P435 159 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 C17orf107Q6ZR85 190 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 KIR3DL3Q8N743 410 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 TBC1D15Q8TC07 691 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 MUL1Q969V5 352 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 UPRTQ96BW1 309 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 FOXRED1Q96CU9 486 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-206ENST00000474828 FAHD2AQ96GK7 314 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 NR1H4Q96RI1 486 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-206ENST00000474828 NUDT16L1Q9BRJ7 211 aaKnown RBP13.99□□□□□ -0.17
SCAF11-206ENST00000474828 C7orf69Q9H7B7 122 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 CNTD2Q9H8S5 307 aa13.99□□□□□ -0.17
SCAF11-206ENST00000474828 CUBNO60494 3623 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 A0A087WXM4 84 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 TRAV1-2A0A0B4J238 106 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 TMEM82A0PJX8 343 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 ZNF780AO75290 641 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-206ENST00000474828 HAND1O96004 215 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 FAM157CP0CG43 387 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 JUNBP17275 347 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-206ENST00000474828 HNF1AP20823 631 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 GABRA2P47869 451 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 CEBPDP49716 269 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-206ENST00000474828 PAX5Q02548 391 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 IKZF1Q13422 519 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 IL13RA2Q14627 380 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 CHRFAM7AQ494W8 412 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 FIP1L1Q6UN15 594 aaKnown RBP13.98□□□□□ -0.17
SCAF11-206ENST00000474828 BTNL3Q6UXE8 466 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 C1orf122Q6ZSJ8 110 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 SATL1Q86VE3 508 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 BATF2Q8N1L9 274 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 PNLDC1Q8NA58 520 aaKnown RBP13.98□□□□□ -0.17
SCAF11-206ENST00000474828 TSPAN14Q8NG11 270 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 MRPS24Q96EL2 167 aaKnown RBP13.98□□□□□ -0.17
SCAF11-206ENST00000474828 SNX22Q96L94 193 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 GPER1Q99527 375 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 GFI1Q99684 422 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 SIRPDQ9H106 197 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 TCF7L1Q9HCS4 588 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 GHRLQ9UBU3 117 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 DOCK11Q5JSL3 2073 aa13.98□□□□□ -0.17
SCAF11-206ENST00000474828 MAS1P04201 325 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 CSN2P05814 226 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 PRKACAP17612 351 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 COL10A1Q03692 680 aa13.97□□□□□ -0.17
SCAF11-206ENST00000474828 OR8H2Q8N162 312 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms