RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 COX4I2Q96KJ9 171 aa5.6□□□□□ -1.51
ATG4A-207ENST00000474825 DIRC2Q96SL1 478 aa5.6□□□□□ -1.51
ATG4A-207ENST00000474825 PECRQ9BY49 303 aa5.6□□□□□ -1.51
ATG4A-207ENST00000474825 MYEF2Q9P2K5 600 aaKnown RBP5.6□□□□□ -1.51
ATG4A-207ENST00000474825 ZDHHC8Q9ULC8 765 aa5.6□□□□□ -1.51
ATG4A-207ENST00000474825 ST3GAL6Q9Y274 331 aa5.6□□□□□ -1.51
ATG4A-207ENST00000474825 POLDIP2Q9Y2S7 368 aa5.6□□□□□ -1.51
ATG4A-207ENST00000474825 CADP27708 2225 aa5.6□□□□□ -1.51
ATG4A-207ENST00000474825 HIVEP3Q5T1R4 2406 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 TMEM235A6NFC5 223 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 NAP1L6A6NFF2 107 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 TUBAL3A6NHL2 446 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 VSTM5A8MXK1 200 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 F5H5P2 479 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 TRAPPC2LH3BP13 241 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 GEMIN2O14893 280 aaKnown RBP5.59□□□□□ -1.51
ATG4A-207ENST00000474825 ZG16O60844 167 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 PDCD6O75340 191 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 RHBDL1O75783 438 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 GOSR1O95249 250 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 CYB5AP00167 134 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 LHBP01229 141 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 CSF1P09603 554 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 OR4A8P0C604 315 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 PTHLHP12272 177 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 GNB3P16520 340 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 TBPP20226 339 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 BCL3P20749 454 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 FUT3P21217 361 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 DTYMKP23919 212 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 LMO1P25800 156 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 BLVRBP30043 206 aaPredicted RBP5.59□□□□□ -1.51
ATG4A-207ENST00000474825 APOBEC3AP31941 199 aaPredicted RBP5.59□□□□□ -1.51
ATG4A-207ENST00000474825 RCVRNP35243 200 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 CBX5P45973 191 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 RAG2P55895 527 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 AP3S2P59780 193 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 SELENOVP59797 346 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 ACTBP60709 375 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 ACTG1P63261 375 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 PAX5Q02548 391 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 SRSF1Q07955 248 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATG4A-207ENST00000474825 MADCAM1Q13477 382 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 TAF9Q16594 264 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 SWI5Q1ZZU3 235 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 MST1LQ2TV78 715 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 PIGYQ3MUY2 71 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 MZT2BQ6NZ67 158 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 Q6P435 159 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 SLC22A25Q6T423 547 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 WDR82Q6UXN9 313 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 Q6ZS49 121 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 NRARPQ7Z6K4 114 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 RTN4RL2Q86UN3 420 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 FAM90A1Q86YD7 464 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 GAPTQ8N292 157 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 TOMM5Q8N4H5 51 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 OR10AD1Q8NGE0 317 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 LINC01560Q8TB33 94 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 Q8TCH9 128 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 DVL3Q92997 716 aaPredicted RBP5.59□□□□□ -1.51
ATG4A-207ENST00000474825 SLAMF9Q96A28 289 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 PLPPR2Q96GM1 343 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 MEGF10Q96KG7 1140 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 MARVELD1Q9BSK0 173 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 SPACA1Q9HBV2 294 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 MSL2Q9HCI7 577 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 HRASLSQ9HDD0 168 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 RASL12Q9NYN1 266 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 NKIRAS2Q9NYR9 191 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 TREM2Q9NZC2 230 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 TAAR3PQ9P1P4 343 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 IL19Q9UHD0 177 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 DUSP13Q9UII6 198 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 ELF5Q9UKW6 265 aaPredicted RBP5.59□□□□□ -1.51
ATG4A-207ENST00000474825 FZR1Q9UM11 496 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 CACNG2Q9Y698 323 aa5.59□□□□□ -1.51
ATG4A-207ENST00000474825 ANKHD1Q8IWZ3 2542 aaKnown RBP5.58□□□□□ -1.52
ATG4A-207ENST00000474825 TRBV6-6A0A0A6YYG2 114 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 A0A1B0GVG6 124 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 PLSCR5A0PG75 271 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 FAM221AA4D161 298 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 CLEC18AA5D8T8 446 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 C17orf100A8MU93 164 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 SRRM5B3KS81 715 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 B9A039 149 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-207ENST00000474825 IFNL4K9M1U5 179 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 CDIPTO14735 213 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 SSX4O60224 188 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 NAPSAO96009 420 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 KNG1P01042 644 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 IGHV1-46P01743 117 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 CD3EP07766 207 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 H2AFB1P0C5Y9 115 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 H2AFB2P0C5Z0 115 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF735P0CB33 412 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 SPNP16150 400 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 SERPINF1P36955 418 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 SRP9P49458 86 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms