RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TRAV38-1A0A0B4J264 116 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 TMEM82A0PJX8 343 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 MEGF11A6BM72 1044 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 A8MXK9 166 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 C22orf46C9J442 243 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 TRAPPC2LH3BP13 241 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 SLC22A1O15245 554 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 SIGLEC5O15389 551 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 ADAM20O43506 726 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF737O75373 536 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 NXPH2O95156 264 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 CLEC2LP0C7M8 214 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 TMEM225BP0DP42 221 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 DUSP1P28562 367 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 PRDX2P32119 198 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 PLA2G7Q13093 441 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 MICBQ29980 383 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 MIDNQ504T8 468 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 WDR25Q64LD2 544 aaPredicted RBP5.79□□□□□ -1.48
LIMD1-204ENST00000474665 Q6P435 159 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 METAP1DQ6UB28 335 aaPredicted RBP5.79□□□□□ -1.48
LIMD1-204ENST00000474665 CDH26Q8IXH8 852 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 MKXQ8IYA7 352 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 FAM58AQ8N1B3 248 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 MUC20Q8N307 709 aaPredicted RBP5.79□□□□□ -1.48
LIMD1-204ENST00000474665 SPICQ8N5J4 248 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 JAGN1Q8N5M9 183 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 ZNRF1Q8ND25 227 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 THRSPQ92748 146 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 SDSLQ96GA7 329 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 CHCHD6Q9BRQ6 235 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 UQCC2Q9BRT2 126 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 FUNDC2Q9BWH2 189 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 MRPS26Q9BYN8 205 aaKnown RBP5.79□□□□□ -1.48
LIMD1-204ENST00000474665 SEBOXQ9HB31 216 aaPredicted RBP5.79□□□□□ -1.48
LIMD1-204ENST00000474665 LPAR2Q9HBW0 351 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 RASL12Q9NYN1 266 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 CKLFQ9UBR5 152 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 POLDIP2Q9Y2S7 368 aa5.79□□□□□ -1.48
LIMD1-204ENST00000474665 POLR3KQ9Y2Y1 108 aaPredicted RBP5.79□□□□□ -1.48
LIMD1-204ENST00000474665 A0A0B4J203 849 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 LOC100506127A0A0U1RQW1 187 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 SMIM30A4D0T7 59 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 SLC17A2O00624 439 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 DVL1O14640 695 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 LDLRAD4O15165 306 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 TMPRSS2O15393 492 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 NDUFA2O43678 99 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 PSPNO60542 156 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 ARL6IP5O75915 188 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 KNG1P01042 644 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 AVPP01185 164 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 OCMP0CE72 109 aaPredicted RBP5.78□□□□□ -1.48
LIMD1-204ENST00000474665 VSIG8P0DPA2 414 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 RPS2P15880 293 aaKnown RBP5.78□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF16P17020 682 aaPredicted RBP5.78□□□□□ -1.48
LIMD1-204ENST00000474665 SDC2P34741 201 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 PITPNBP48739 271 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 CAV3P56539 151 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 CLDN12P56749 244 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 FGF12P61328 243 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 LCN2P80188 198 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 UNC119Q13432 240 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF146Q15072 292 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 PDCD1Q15116 288 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 CTF1Q16619 201 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 SMIM21Q3B7S5 101 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 PIGYQ3MUY2 71 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 SLC22A6Q4U2R8 563 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 SIGIRRQ6IA17 410 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 OR10K2Q6IF99 312 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 GLIPR1L1Q6UWM5 242 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 C17orf107Q6ZR85 190 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 C1orf229Q6ZS94 237 aaPredicted RBP5.78□□□□□ -1.48
LIMD1-204ENST00000474665 RTN4RL2Q86UN3 420 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 NKAIN3Q8N8D7 197 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 OR51T1Q8NGJ9 327 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 TBC1D15Q8TC07 691 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 EMG1Q92979 244 aaKnown RBP5.78□□□□□ -1.48
LIMD1-204ENST00000474665 NEIL1Q96FI4 390 aaPredicted RBP5.78□□□□□ -1.48
LIMD1-204ENST00000474665 GPER1Q99527 375 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 SHARPINQ9H0F6 387 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 ELL3Q9HB65 397 aaPredicted RBP5.78□□□□□ -1.48
LIMD1-204ENST00000474665 NEK6Q9HC98 313 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 TCF7L1Q9HCS4 588 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 EXOSC4Q9NPD3 245 aaKnown RBP5.78□□□□□ -1.48
LIMD1-204ENST00000474665 IL36GQ9NZH8 169 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 DNAJB11Q9UBS4 358 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 MIOXQ9UGB7 285 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 OR14J1Q9UGF5 321 aa5.78□□□□□ -1.48
LIMD1-204ENST00000474665 MRPS28Q9Y2Q9 187 aaKnown RBP5.78□□□□□ -1.48
LIMD1-204ENST00000474665 TENM1Q9UKZ4 2725 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 A0A0A6YYD4 124 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 TRAV24A0A0B4J272 114 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 IFITM5A6NNB3 132 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 TMEM14DPA8MWL7 114 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 B4DSR2 109 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 K7N7A8 449 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 MAGEB3O15480 346 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 AIREO43918 545 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms